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Detailed information on CNT3082566


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FJF9|SAU21_ARATH, E-value = 7e-42

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30508399Brassica junceaSolanum lycopersicum15.0750.4782.24107forward

Expression of CNT3082566

Peptides detected in this lncRNA

>peptide 1 (46 aa)
LCNDFLVSFFFFIFSERKSTCHYSSMQRHTKSNDQIRSQEGKKRII*

Sequence

>CNT3082566
CTCTGTAATGATTTTCTGGTGAGTTTTTTTTTTTTCATATTCTCAGAGCGGAAAAGCACATGTCATTACAGTAGTATGCAGAGACACACCAAAAGTAATG
ATCAAATAAGATCACAAGAAGGAAAAAAGAGAATCATATAGGTGTTAACCTTTCTTTTTCATTGGTCTATCCAAAATGTATTAACATGAATCATGATAGT
GTCTATAACATTACTTTCAAAAGATTATAGAATCTCTTTGAACAATTAAGAGGTATAAAATCTCATCTATTCACTGGGAACAAGTCTATCTCTAACTCGA
AGAACAATATGTTGGATAATCCTCATTGCAACCTAGATGTCACAGTGATGAATATATCCTCGGGACAAGGGATTGTTAAGCCACCCATTGGATGATCAAA
ACCAAACTCTTCTTCAGATTTACTTAGTAGACCTTGAAACAAAGGCTGGCTCAAGTATGAGATTGGCACCACATATCTCTTCTTCTGGCTCTCTCCTACG
TACACCGCAATAAACCCTTTTGGTGCCGCTGAGGTTGCCCTTCTGCTTGTTGCAGTAGCTGCTGTTACAGAGCGGCCAAGAATCTTCTTTGCCCCCAATA
GACCTCTCACCAAAGCCATTTTTTAACTGAAAGTTTGATTTCTTTTGAAGTTTTTGAAGATGTATGAAAAGATTAAAGTTATTGGATTGCTTGCTTTAGG
TTGATGATAG