Detailed information on CNT3082129


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30455532Brassica junceaSaccharum spontaneum24.9117.7686.373forward

Expression of CNT3082129

Peptides detected in this lncRNA

>peptide 1 (51 aa)
IRHKESKAQTKYYKLSGPSSTQKSWDLLLLTLFIQQLINTHNLSVTEETHS*

>peptide 2 (36 aa)
LGTRSPRHKQSTINYLDHRQHRNRGTSYYLRFLFNN*

Sequence

>CNT3082129
ATTAGGCACAAGGAGTCCAAGGCACAAACAAAGTACTATAAATTATCTGGACCATCGTCAACACAGAAATCGTGGGACCTCTTATTACTTACGCTTTTTA
TTCAACAACTAATAAACACACACAATTTAAGCGTAACAGAAGAAACTCACTCTTAAAACAGGCCAAACTCAAATCCAAATATCGGAAGTGCAGTCTCCAC
CGGGATACCTCATCTCATGGGCAAGCGCAGGACCGTCAGGTTCTTCACCAAAGTCCACAAAGAAATCAGGGTTTATAGAGAGACCACCTTTCT