Detailed information on CNT3081844


BLAST search results

BLAST vs Swiss-Prot:
sp|P42792|CYB_ARATH, E-value = 7e-77

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30390425Brassica junceaTriticum turgidum33.7624.9793.64236forward
CNT30552006Brassica junceaOryza glaberrima34.1913.5894.56239forward
CNT30443845Brassica junceaAegilops tauschii33.7648.6692.8236forward
CNT30309525Brassica junceaCamelina sativa15.4526.15100108forward
CNT30229709Brassica junceaAnanas comosus19.1728.1597.01134forward
CNT30627910Brassica junceaDaucus carota22.1732.0991.61155forward
CNT30684485Brassica junceaTriticum urartu33.7643.793.64236forward
CNT30482869Brassica junceaChara braunii18.1748.8583.46127forward
CNT30148125Brassica junceaBrachypodium distachyon19.1748.0395.52134forward

Expression of CNT3081844

Peptides detected in this lncRNA

>peptide 1 (28 aa)
MRRGGHRISRYIIVGMSQNIRSIKNPNRK

>peptide 2 (39 aa)
MVLPQVDIRSNLVVSNPPKATKTFLGESVENLNYAHTYF*

Sequence

>CNT3081844
CTACATTATGACCCAGAAACCTCGAGTGAATAGCGAGTCATTTATATTCTTGCAGTAAAGGTAGTTCTATATTTTTTTTCTTTCTTTATCAGAGGGGGCC
CCTTAGGCCTTGGGGGGCGGGGCCTCTTTTTTGATTTTTTAATAAAAAAGGGGGAGAGGGACCCTTTTTGATTTTTGAAGTACAGCCCTACCCTATAGTG
GAGTTATCTTTTCCCTATCTAAGCTATATCAACATAGCAAACTAGAAAACTTATCCGCTTGTCAATTCTTGGTGTAATATGTAAATGATTGGTGTCAAAA
TTTTTCACTGATCAGGTGTGATCAGTCTCATCCGTGTAAGAATTAGGAATTCCTCTTCCAACTCGTCCCAGAATGGGCGTTATGGCAAAGAACAAGAAGA
AAACCAAAGGAGAAATTTGTCCAATAGTAACAAATGGTGCTTCCACAGGTTGACATCCGATCCAACCTAGTAGTAAGCAATCCGCCAAAAGCAACCAAAA
CATTCCTTGGTGAATCGGTCGAAAACTTGAACTACGCACATACATACTTTTAAAAAAAGGTATACTACGAAGAATGGCATGGATCGGTAGGAAATACCAT
TCCGGCACAATATGAGGCGGGGTGGACATCGGATTAGCAGGTATATAATTGTCGGGATGTCCCAAAACATTAGGAGCATAAAAAATCCAAATAGAAAAA