Detailed information on CNT3081700


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30506280Brassica junceaNicotiana attenuata18.6428.8191.7685forward
CNT30612193Brassica junceaArabis alpina23.924.3895.41109forward

Expression of CNT3081700

Peptides detected in this lncRNA

>peptide 1 (52 aa)
NRKRVSTLRVLLCHIKKQYERNEDPFFSAASFARTTFCNTTKVKSLSSVNSA*

Sequence

>CNT3081700
AAAACAGAAAACGAGTCTCTACCCTTAGGGTTTTGCTGTGTCATATAAAGAAGCAATACGAGAGAAATGAAGATCCTTTCTTCTCGGCCGCTTCTTTCGC
AAGAACTACATTTTGTAATACGACAAAAGTGAAGAGTTTATCTTCTGTGAATTCAGCATGAGGGCTAAGTGGAAGAAGAAGCGTATGAGGAGACTGAAGA
GGAAGAGACGAAAGATGAGACAGCGATCTAAGTAGTGTTTTCGAACAATCATCTCTGTTTCTTCGTTTTTAAGTTTAACCAAACTCTGTTTTTGAGTTAC
GGTTTGAGTGTTTCGTTTGGACCAAATTAATACAACGTTATTCAAGAGTTCTGTTTATTCACATGTGTTTTTTGATTATAGTTACTCTTCAAGTATGATG
ACGTTAAACAATATGGCTTAATGATAATTTAGATGCTCCTAAGTTTAGGTTCGGCT