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Detailed information on CNT3079933


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30259901Brassica junceaBrassica rapa97.6980.2898.63802forward

Expression of CNT3079933

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MVLEMKMVLGYLLSPGYEGPSRTLNKCSSWVLLVFVFPLWLRMAKQYIEVEA*

>peptide 2 (35 aa)
MCHPCVLGFRSLLLGLASGEVYMFRRRQCYNLVCF*

Sequence

>CNT3079933
AAAACAGGTTGAAGAGCCATCGTTTTCTAGATCTGATGAACCTTTGGTAGATCTGTGGGCGTGAGCGGTGTCTCCCGGTGGTGTATAAGGTTTCACCTTT
GTCAGGTCTCCGTCTGCGTCTCTGATCAAGATTCAGCAACGGTATAGCAGTGTCGTGGTTGTGTGTGGTGAGCAAGTGAAGGTCATGGTCCTTGAGATGA
AGATGGTTTTAGGTTACCTCTTATCTCCCGGTTATGAAGGTCCCTCTCGCACCTTGAATAAGTGTTCTTCCTGGGTGCTTCTAGTCTTTGTGTTTCCTCT
GTGGCTTCGTATGGCGAAGCAATATATCGAGGTGGAGGCGTGAAGATCTCCAGATGAAGGTGCGGTTGAGGTGGACCTTATCTCGAGTGTTGTCTCTTCA
CGGTTTTGTGCCTTAGTGTAGGCGTTGTGGTTTGGTAGTCGTCATCGTGAACAGGTAGTTCAGATGAGGTCTTGATGGTTCAGGCGTTGTCATTGTGAAC
TTGGGGTTCAAATGAAGTCTCAGCTCTTCCGTTCTATTGCGTTGCGTGCTATCTTGCTTAGTTCATGGTAAGAATTCCGGCTAGCTATTGATTGTTAAGT
CTTTGCCCTTTTTATCTAGGTTTGATTTGATCTGGGTTTGTTGAAAGAGTTGATTTATATTTTAGTTGTTCATGTGTCACCCGTGTGTTTTGGGTTTTCG
ATCCCTTCTTTTGGGTTTAGCTTCCGGGGAGGTCTATATGTTCCGCCGGCGTCAATGTTACAATCTTGTATGTTTCTAATGTTATCAATGAAATTCAGAG
GGAAAAAAAAAAAAAAAAAAA