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Detailed information on CNT3079816


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30317272Brassica junceaCorylus avellana34.1824.1688.394forward
CNT30372848Brassica junceaArabidopsis thaliana45.4520.8397.6125forward
CNT30709081Brassica junceaGlycine max49.4518.0990.44136forward
CNT30296001Brassica junceaTriticum aestivum38.1826.3291.43105forward
CNT30383102Brassica junceaTriticum turgidum41.0938.5791.15113forward
CNT30562914Brassica junceaActinidia chinensis36.7333.2283.17101forward
CNT30135921Brassica junceaLolium perenne34.182589.3694forward
CNT3065Brassica junceaZea mays42.1847.5487.93116forward
CNT3041226Brassica junceaChlamydomonas reinhardtii34.5519.2385.2695forward
CNT30648424Brassica junceaRosa chinensis29.0924.9292.580forward
CNT30129276Brassica junceaCorymbia citriodora20.3613.491.0756forward
CNT30719750Brassica junceaTriticum spelta41.0947.4891.15113forward
CNT30361585Brassica junceaSorghum bicolor37.4527.4790.29103forward
CNT30595858Brassica junceaOryza meridionalis42.9110.687.29118forward
CNT30369756Brassica junceaOryza glumipatula42.918.788.14118forward
CNT30104286Brassica junceaOryza rufipogon92.3637.9787.4254forward
CNT30575848Brassica junceaOryza barthii90.9127.8184.8250forward
CNT30579614Brassica junceaEchinochloa crusgalli37.4526.0889.32103forward
CNT30117881Brassica junceaOryza nivara84.3626.8287.07232forward
CNT30174517Brassica junceaVigna angularis46.5563.6882.81128forward
CNT3065151Brassica junceaSelaginella moellendorffii32.3643.283.1589forward

Expression of CNT3079816

Peptides detected in this lncRNA

>peptide 1 (90 aa)
LRDETVEVGVGWPLNVQRTPADVVDSFIVEEDRDISVFQERVSGEDTVVRLKVDEDSTWDVLPCTGLTEEGVESIVTSANSLVTRHLAIRL

Sequence

>CNT3079816
ACCTGAGAGACGAGACGGTTGAGGTTGGTGTAGGTTGGCCTCTCAATGTTCAGAGAACGCCTGCAGATGTCGTAGATAGCTTCATTGTCGAGGAGGATAG
AGACATCAGTGTGTTCCAGGAGAGAGTGAGTGGAGAGGACACTGTTGTAAGGCTCAAGGTCGACGAAGACAGCACGTGGGACGTGCTTCCCTGCACCGGT
CTCACTGAAGAAGGTGTTGAAAGCATCGTCACCTCCGCCAACAGTCTTGTCACTCGGCATCTGGCCATCAGGCTG