Detailed information on CNT3079268


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674307Brassica junceaSetaria viridis98.526.5696.63267forward
CNT30201967Brassica junceaPisum sativum73.810099200forward
CNT30491147Brassica junceaOlea europaea33.5823.6489.0191reverse complement
CNT30554303Brassica junceaOryza glaberrima77.1295.8793.3209forward
CNT30597359Brassica junceaFraxinus excelsior33.583.1686.8191forward
CNT30679330Brassica junceaTriticum urartu98.5257.0596.25267forward
CNT30481303Brassica junceaChara braunii85.6138.684.48232forward
CNT3038653Brassica junceaCucumis melo10027.2997.42271forward
CNT30104344Brassica junceaOryza rufipogon98.5216.5396.63267forward
CNT30114308Brassica junceaFicus carica35.795.798.9797forward

Expression of CNT3079268

Peptides detected in this lncRNA

>peptide 1 (33 aa)
TWSYETGMHPGSRDSFIEFQQFLPLLKSPQERS*

Sequence

>CNT3079268
ACCTGGTCGTATGAAACTGGCATGCATCCTGGCTCCCGAGACTCTTTCATAGAATTCCAACAATTTCTCCCGCTCCTCAAAAGCCCACAGGAACGGAGTT
AATGCTCCCACATCCATAGCATGAGTAGTTAAAGCAAGTGAATGATTTGAAATTCGAGTTATTTCACGGAATAACACTCGTATATATTGAGCTCGTAATG
GTACCTCGCAATTCAAAAGTTTCTCTACAGCTGAAGAATGAGCGTGTTCTTGGGCCATCATAGAAACATAG