CANTATAdb - search

Detailed information on CNT3079122

BLAST search results

BLAST vs Swiss-Prot:
sp|F4JWM0|DSC2_ARATH, E-value = 7e-24

BLAST vs NONCODE: nothing found

Expression of CNT3079122

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MVINVIKEIIKAPRHNVFIIYEINSSSRQQDASFESKGWRKRSWSLIDL*

>peptide 2 (47 aa)
HASSNGYKRYLETEIVLTKTSLLLLLKSNYFLGTLTNTSLSVPGCLD*

>peptide 3 (40 aa)
MSRCFDPYWTVRPFCLPLNLQDTRMDNFFSSPWSSTSSKK*

>peptide 4 (31 aa)
MTISYIYGTLNLIRFLLLVSASSSRLDLSPS*

>peptide 5 (30 aa)
MSSSSTRLIVPLDSKMQALNLRDGGRGPGV*

Sequence

>CNT3079122
TCATGCATCTTCAAATGGTTATAAACGATATCTTGAAACAGAAATTGTTCTTACAAAGACATCTTTGCTATTACTGTTAAAGTCTAATTATTTTCTTGGA
ACATTAACAAACACCAGTTTGAGTGTCCCTGGGTGTTTAGATTGAGCTTTCTCTTCTTGGAAAATTAATCTGCACACAATCACAAAATATATAACAACAT
GACAATTTCATATATCTACGGAACGCTGAACCTCATTCGTTTCTTGCTCCTTGTCTCTGCATCATCATCACGTCTAGATTTGTCTCCTTCTTGAGTTTTA
TCTACATCATCACGTCCTGATTCTTCTTCGTCCTCCAGAAGTTGTACACCACAAGCTTTCACTTTCCATTTCTTAGAAAAGACTTTGAAATGAAACACAA
GCTCGCTGAAAGTAGCTTCTTCAGCTTCAGGGAAATCCTGATCTAGACAGAAAGAATCTTCAAATGTATACAGACGTTCCTCCCATCCACATATATAAGG
CATGTCGCGCTGTTTTGATCCATATTGGACAGTGAGGCCATTTTGTTTACCCCTAAACCTACAAGACACACGCATGGACAACTTCTTCTCCTCTCCATGG
TCATCAACGTCATCAAAGAAATAATTAAGGCGCCAAGACACAATGTCTTCATCATCTACGAGATTAATAGTTCCTCTAGACAGCAAGATGCAAGCTTTGA
ATCTAAGGGATGGAGGAAGAGGTCCTGGAGTCTGATTGATCTTTAGGAAACCTGAAGTAGCTCGGTAAGTGAAGTGTGCAGGCACTTCTACACCCGGTAC
GAGCGTAGATTCACCATCATCATCACTGTCATCTTCGTCAACAACATCATCACTGTCATCTTCGTCAACAACATCATGGACCAAAAGTTGTA