Detailed information on CNT3079114


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30378209Brassica junceaArabidopsis thaliana8.8539.1284275forward
CNT30270405Brassica junceaChenopodium quinoa2.9320.583.5291forward
CNT30559435Brassica junceaActinidia chinensis3.0325.4788.394forward
CNT3061663Brassica junceaArabidopsis lyrata3.3527.1584.62104forward

Expression of CNT3079114

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MSLPSSRDAYEQHMSLLAVRRCSGRSCGGGSRTVAPKLLIYRVFF*

>peptide 2 (41 aa)
MLEVMCAHSLSVTAFFLSLSVSHHYKYSNSCVYIFILILTF*

>peptide 3 (35 aa)
MPSSCCKQIHIFKMYRAMFLLNETSTFEFICVYSH*

>peptide 4 (31 aa)
MHMSSTCRCWRSGDAQGGVAVAARGQSLQSF*

>peptide 5 (29 aa)
MILASWKIKRKTLPGIRERLGWNLRQSII*

>peptide 6 (54 aa)
EIHTPIGVIRAMFIPTGTSIYIYIYIYIYLIMFIYSLSLKWLTRARVFGWIIDA*

>peptide 7 (63 aa)
MNILNITIYIKLGPISQNTIKLGRYSRFVWDELVNCDDKYLLYFTFLCLDYRNWFMHQFVVSK*

>peptide 8 (63 aa)
MKHIHRDGLSDKKLMVTEESEHTWWLSCIFEGFMLEAMCAHYLSVTLFFSLTSLTMFTSVLMF*

>peptide 9 (72 aa)
MLFIFYFAVFMNLKLIFLLFRFSKTLNSTKSFSLSSQSILSVLFNMSLLFSHQAKRQHLGLRQILLVAMVDL*

>peptide 10 (31 aa)
MSPTTLAMSPNDFFGLSSSTSYEFAVEQGCI*

Sequence

>CNT3079114
GAAATACATACGCCTATAGGAGTAATTAGAGCGATGTTCATCCCTACTGGAACATCAATATATATATATATATATATATATATATATTTAATTATGTTTA
TTTATTCATTGAGTTTGAAGTGGCTTACAAGGGCTAGGGTTTTTGGTTGGATCATAGATGCATGAAACATATACACAGGGATGGTTTGAGTGACAAGAAA
TTGATGGTGACAGAAGAGAGTGAGCACACATGGTGGCTTTCTTGCATATTTGAAGGTTTCATGCTTGAAGCTATGTGTGCTCACTATCTATCTGTCACCT
TGTTCTTTTCGCTTACATCTCTCACCATGTTTACTTCTGTTTTGATGTTTTAGATTTTTCTCCACTTTTTTTTTTATTGGTTTCAAAAACATGAATTAGT
ATATCAAAAAACCATTATTATGCCATCATCATGTTGTAAACAAATACATATCTTTAAAATGTATAGAGCGATGTTCCTCCTTAATGAAACATCAACATTT
GAATTTATTTGTGTATATAGTCATTGAGTTTGAAGTTCCATGAATGACTAGAGTTTGTAGTTGGAGCACAGATTCATGAAACATATATATACGGATGGTT
TGAGTGCTAAGGAATTGATGGTGACAGAAGAGAGTGAGCACACATAGTGGCTTTCTTGCATATTTGAAGATCTCATGCTTGAAGTTATGTGTGCTCACTC
TCTATCTGTCACCGCCTTCTTTCTCTCTCTCTCCGTCTCTCACCATTACAAATATTCTAATAGTTGTGTATATATTTTCATTTTAATCTTGACTTTTTAG
ATTTAATCCATTCTTTATTTTACAAACATGAATTAGTATATTCAGTAATATCAATTAGTATGCATCATCATGTAGATGTTGTCTGTCAATATGATTAGCG
TATTCAGAAACATCAATTAGTATACTCAGCAAATCTTAATTAGCAGAAAGTATGAATTATATTCAAGCTTTAACTACGACTAAAACGTGGACAAAGAACA
TGTCTCATCACACCTAACGCAGCGACATGGGGGCATTTGATTTGGTAGATTTTTTCAAATATAGTCGACTATCATGCAGGTTGAAAATTATCTAAACAAT
TAGTAAAACAATATAAAGTTGCTGAGACAGTTAATCTACATTTGAGAGATTAGCTATATCGTTCCCAATCCTGGCTACCTTCTTTTTCTGATGCTTTTTA
TTTTTTATTTTGCAGTGTTTATGAATTTAAAGTTGATTTTTCTTCTCTTCAGGTTCTCAAAAACCCTAAATTCTACCAAATCATTTTCTCTATCGTCTCA
ATCTATTCTCTCTGTACTTTTCAACATGTCTCTTCTGTTTTCCCATCAAGCAAAGCGACAGCATCTAGGACTCCGCCAAATACTATTAGTCGCAATGGTG
GACCTATAAATTATTTTACGGGAATAATATTTTATTCAAGGAAAATTAAAAGATATCGTGTATTGTATACGACAAACAAAGCGTTATCTATCCATACGTA
GGAGCCAAATATTTACAAGCAGAAAACAAATAAAAGATATTAATAAACAATTAGTATATTTATATATGTATATATATCATGATCAAAATTAGTATATAAG
CTTGTTTCTTAAATTATATATGGTTTAGGGGTTCATTATCTCACTCACACTATTGACTCCAATATCTTATACCTGCCTCCACTTGAAAATAACTTCAACA
TCAACATGATCTTGGCAAGTTGGAAAATAAAAAGAAAAACGTTACCAGGAATACGAGAGAGACTCGGTTGGAACTTGAGGCAGAGTATTATATGATTGTA
TACGACATTTAATACTTCATGTTTTGTGAATAAATATTTCAAACCATATGTCGCAAAAGATTTGAGTCTCTTGTAGAGGCCAATTCAGTCACGGCTGGAT
CAAGCATTCATTTTAAACTGACTCTACTTATTGCTGAAACGTGGTGAGCTGTAGATGTCTATGTAACAGAATGTTCCTGCTGCAGATGTCAGGTGGTTTT
GCGTGATCGACGTTGGGCTAAAACCAACGTCGTTGATCTTGCTTGCTCACATAGTTTTTTTTTGTCTAAGAGTATATTGGCCGGTTTGAGGTCGCGGTGA
ACCGGAGGTTCTGGTTTAGCTTGATGAAGGAATGGTAAGACAGTAGCAATCTCTGCCGCTATTCCGAAACGTTCCTCCACGAAAGCGATTGAGTGTTTCT
TGTCCAAAAGAGTCTATATCCTCTAAGCTTCCGTTTTCCATAAACTCATAAACCAAACATATATATTGGACACGCACAAAGGAGAAAGACCATGTGAGGA
TGCCCTATGCTACTTAGAATCTCAACCTGTAAAATGAGAGTATACAAATCATTAGACTAAACTAATTGAGCGTTAATCTTGAGCCAAAGAAACTCTACTT
GTTGAAACTGCTCTTTTTCCTTAAACGGCATCATGTTTCCGCCGCGCACAATCCTTGATAGTTGATAGGGATAGAGCCAGTCATGAGATTTTTGAGATCT
ATACAAAACAAAAAATGAATATTTTAAATATCACAATATATATTAAATTAGGACCAATTTCTCAAAATACTATAAAACTAGGTAGATATTCACGCTTTGT
TTGGGATGAACTTGTGAATTGTGATGACAAATATCTATTATATTTTACATTTTTGTGCTTAGATTATAGAAATTGGTTTATGCATCAATTTGTAGTATCG
AAATAATTTTAGTATTTGACCAAAAAAAAGAGAAATAATTTTAGTCATACCAAATGTAAAATCATACGCATATAGTTTGTAGTATTGATAAAATCATAAG
GGATGTCACCAACAACCTTGGCGATGTCACCAAATGACTTCTTTGGATTGAGTTCCTCAACGTCTTATGAGTTTGCCGTCGAGCAGGGATGCATATGAGC
AGCACATGTCGTTGCTGGCGGTCAGGAGATGCTCAGGGCGGAGTTGCGGTGGCGGCTCGAGGACAGTCGCTCCAAAGCTTTTAATTTATAGGGTTTTCTT
CTAAATGTAGCCAGTTATTTCTAGTTTATGTCTATTTTTCATCCGATTAAATCTATTGTAAACCACTAAACTTTTTGGGACGGATTAATATAAATATAAA
TATTAA