Detailed information on CNT307903


BLAST search results

BLAST vs Swiss-Prot:
sp|P12360|CB11_SOLLC, E-value = 2e-56

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674046Zea maysSetaria viridis34.6422.3596.24133forward
CNT30304990Zea maysTriticum aestivum28.3943.4390.83109forward
CNT30400439Zea maysTriticum turgidum45.0565.2894.22173forward
CNT30567058Zea maysActinidia chinensis35.4237.7887.5136forward
CNT30588696Zea maysMusa acuminata29.6942.3890.35114forward
CNT30443761Zea maysAegilops tauschii45.0536.4294.22173forward
CNT30256504Zea maysAvena sativa5044.6593.23192forward
CNT30669889Zea maysTriticum dicoccoides28.3942.9189.91109forward
CNT30346386Zea maysEragrostis tef55.2130.3794.34212forward
CNT3058384Zea maysAmborella trichopoda49.4839.8381.05190forward
CNT30102128Zea maysOryza rufipogon48.9632.4792.55188forward
CNT30576871Zea maysOryza barthii48.9621.8692.55188forward
CNT30580093Zea maysEchinochloa crusgalli60.6830.0696.14233forward
CNT30497042Zea maysDigitaria exilis62.2430.0695.4239forward
CNT30551236Zea maysOryza brachyantha62.2424.0294.56239forward
CNT3040262Zea maysMarchantia polymorpha2512.7885.4296forward

Expression of CNT307903

Peptides detected in this lncRNA

>peptide 1 (93 aa)
MMMSPMLLCQGSARRPFLISLSLYSSSLAGSLEKPSGSKAPPGYFFFSGSFSMVRWCSAKAMATNSTARMVGSVPHGTGAPRYVACPPGTAAHS

Sequence

>CNT307903
GTCGTCGTCGTTGTACTGCTCCTGCACGCAGGCAGGCAGTGCCTAGTGCCTAGTCGTAATAATCAACCAATATAATTGTCAAGGGGAGATCGATCTAGGG
ATGATGATGTCTCCGATGTTGTTGTGCCAGGGGTCGGCGAGGCGGCCGTTCTTGATCTCCTTGAGCTTGTACTCCTCGAGCTTGGCGGGGTCCCTGGAGA
AGCCGAGCGGGTCGAAGGCGCCGCCGGGGTACTTCTTCTTCTCGGGGTCCTTCTCCATGGTGCGCTGGTGCTCGGCGAAGGCGATGGCCACGAACTCGAC
CGCCAGGATGGTCGGCAGCGTGCCCCACGGCACCGGGGCGCCCAGGTACGTGGCCTGCCCGCCGGGGACGGCCGCCCACTCCTG