CANTATAdb - search

Detailed information on CNT3078416

BLAST search results

BLAST vs Swiss-Prot:
sp|Q2V4N0|DF110_ARATH, E-value = 2e-11

BLAST vs NONCODE: nothing found

Expression of CNT3078416

Peptides detected in this lncRNA

>peptide 1 (87 aa)
MAITMKTLITFVFTILFLGSSVHCRTIASAVTPANGYGEIKSELCFLFLSPCNWRYPNGEAMCNDYCKRDKQKSGHCNAHSECCCVF*

>peptide 2 (70 aa)
MVMEKLSQSFASSSCHRVIGDIPMGKQCATTIVREINKSRDIVMPILNVVVFFKYVSKMKSSLSYVFKYL*

>peptide 3 (34 aa)
MFVFLYKVRNRECVKKNHKKLKRISEKLSKNLEI*

Sequence

>CNT3078416
ATGATTCTCAGTTAATATATAAAAGATTCTTTGTATTTTCCGTTGACTAAATATATTCATGAAAATAAAAGGAAACAGTATTTCATTTTTATTTGACTAT
GAAAATACTTCTTAAAATGTATGTTTGTGTTCTTATATAAAGTGAGAAACCGAGAATGTGTGAAGAAAAATCATAAAAAGTTAAAGAGAATATCTGAAAA
GCTATCCAAAAATTTAGAGATATAAAATGGCTATTACAATGAAGACTCTAATCACATTTGTTTTTACTATCCTTTTCCTCGGATCTTCTGTTCATTGTCG
TACTATAGCTAGCGCTGTTACTCCTGCTAATGGTTATGGAGAAATTAAGTCAGAGCTTTGCTTCCTCTTCTTGTCACCGTGTAATTGGCGATATCCCAAT
GGGGAAGCAATGTGCAACGACTATTGTAAGAGAGATAAACAAAAGTCGGGACATTGTAATGCCCATTCTGAATGTTGTTGTGTTTTTTAAGTATGTGTCC
AAGATGAAATCATCTTTATCGTACGTTTTTAAATATCTATAACAGAAGATCTAGAATAAAATAAACAATATTTACCAGATTGAAATTACTTTGCATACAT
TTGAGTAATATTTAT