Detailed information on CNT3077501


BLAST search results

BLAST vs Swiss-Prot:
sp|O49596|HMGB2_ARATH, E-value = 2e-12

BLAST vs NONCODE: nothing found

Expression of CNT3077501

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MPRNAPDLLSGGEEEKLPGFVTESRRCYGPM*

>peptide 2 (44 aa)
MLWTDVREIRSKESVFGYGPKGFGYEERCLNMEQMECFFNCFCL*

>peptide 3 (75 aa)
MLPRLKITSLTTRRTLRPYNKKLKKYPKEDEGSEKSVPEVRMKEKGCKSIKTTRYTNLLKLRTLQLRKLREILSI*

>peptide 4 (32 aa)
KISPPDRFDFFFLLIEKSIINHYGIFSTDSPA*

>peptide 5 (34 aa)
MFKYGTNGMFFQLFLLIRVLYLNSMRLCFRIIPF*

Sequence

>CNT3077501
AAAATATCGCCTCCAGACCGATTCGACTTCTTCTTCCTTCTGATTGAAAAATCAATCATAAATCACTATGGTATCTTCTCCACCGATTCACCTGCGTAGA
GTCTCATTTCCACCCCTATCACTCATAAAGACCCAACCGTTATTGCATTAACACAAAGCTAATCAACTCTTCCAATTCTCACACCTAAAAACGTTATATA
TATAGCTCTTTTACGGTGCTCTCATTCACCAAGAAGCTACCTTCATCAGTTTGCAACTATTGACTAATGCTTCTTCATTAGGCCAAGATCTCATACATTT
ATCCTTTTGCTCCCTTCTTTGCTCGACAATCTTTCGCAAGGTGGATTATCTATGTGACCAAGGAGCCACCGAAGTGAGCAGGATGTAGCAAAGCGGCTGC
AACTGATCCAAACAAACCAAAAAGGCCAGCCGGGGCCTTCTTCTTTTTCATTTGCAAAAGCTGCTGGAGATAAGTGGAAATTCTTGACAAATGGGTGAGG
AGAAATAACTTCATGTTGCCAAGGCTGAAAATCACAAGTTTGACTACGAGAAGAACATTGAGACCGTACAACAAGAAATTGAAGAAATATCCAAAGGAAG
ATGAGGGATCTGAAAAATCAGTGCCAGAGGTTAGGATGAAAGAGAAAGGGTGCAAGAGCATAAAAACTACACGCTACACAAACCTCTTGAAGCTAAGGAC
ATTGCAGCTAAGAAAGCTCAGAGAAATTCTGAGTATTTAAGGGAGAAAGAGAAGAAAACGGTATCAGCGAAAGGCTACAATTGTTTAAGAAATATGTGAA
GCAATGAAATTGAGCAAGGAATCGTCTGATGATGGTGGCAGAAGCTGCTCATTACGCCGAAGTGGCTACTCATAAAACAGATGTGGTTGGGTAGATAGTG
CAAGGGACAAACTCGATTGCAGGGACGGTGGAAGGTGCAGTGGGATATGCAGGGCATAAGGTGGCTATAAGAATGTGGAGTTGATTAAAAATAAATCAGC
AGCGGCTGCTAATATGGTGGTTGGATACACAGTGAGCCAGAAAGAGAAAGCTCAACACAAATGCCAAGAAATGCACCAGATTTGTTGAGTGGGGGTGAGG
AAGAGAAGCTACCAGGGTTTGTCACAGAATCAAGAAGATGCTATGGACCGATGTAAGAGAAATTAGAAGTAAGGAAAGTGTATTCGGATATGGACCAAAA
GGGTTCGGGTATGAAGAAAGATGTTTAAATATGGAACAAATGGAATGTTTTTTCAATTGTTTTTGCTTATAAGGGTCCTTTATCTAAATAGCATGAGACT
ATGCTTCAGAATAATTCCCTTCTAAATAAAAACCGCTCTTTTTCTATTAAA