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Detailed information on CNT3077383


BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641251Brassica junceaNymphaea colorata68.950.4884.32893forward
CNT30528977Brassica junceaEucalyptus grandis71.368.9684.09924forward
CNT30727322Brassica junceaCorchorus capsularis70.4571.8383.46913forward
CNT30526024Brassica junceaPhaseolus vulgaris71.0669.6183.5921forward
CNT3044330Brassica junceaPrunus dulcis69.9174.0884.44906forward
CNT30169882Brassica junceaPistacia vera67.7542.5684.05878forward
CNT30636126Brassica junceaCapsicum annuum71.1449.9784.06922forward
CNT3089455Brassica junceaVigna radiata68.2172.784.16884forward
CNT30171101Brassica junceaTrifolium pratense71.1455.4483.19922forward
CNT30264722Brassica junceaBrassica rapa73.4689.9897.58952forward
CNT30612915Brassica junceaArabis alpina52.770.1286.38683forward
CNT30217431Brassica junceaKalanchoe fedtschenkoi70.5267.583.81914forward
CNT30652285Brassica junceaRosa chinensis70.5275.184.25914forward
CNT30716337Brassica junceaMalus domestica golden64.8967.8884.54841forward
CNT30477817Brassica junceaArabidopsis halleri70.2985.1485.84911forward
CNT30410857Brassica junceaPapaver somniferum68.9868.4583.11894forward
CNT30704857Brassica junceaPrunus avium70.4557.8285.21913forward
CNT30643414Brassica junceaCannabis sativa65.981.1884.66854forward
CNT3032244Brassica junceaTheobroma cacao70.4579.4683.24913forward
CNT30120658Brassica junceaCitrus clementina68.2187.8782.92884forward
CNT30174705Brassica junceaVigna angularis71.0659.5384.26921forward
CNT3051129Brassica junceaCucumis sativus65.6696.1684.96851forward

Expression of CNT3077383

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVSELSTSSVIVLPVRVLTKICIPPRSLRTR*

>peptide 2 (43 aa)
EVTAKQNSKFHRIYNVTKHLRIESAWKHSNGLKRDRKQRSSII*

>peptide 3 (44 aa)
MVLKEIGNRGHQLFNRGFITPQTHKPTMISFKENGSKNADIVVS*

>peptide 4 (52 aa)
MVSELSTSRVMVFPVRVLTKICICYSQKMKINTIELRMIGLSICEGEEVFRV*

>peptide 5 (52 aa)
MRRCWSGGIPSLSWILALTLSMVSELSTSSVMVFPVRVFTKICIPPRRRNTK*

>peptide 6 (53 aa)
MPSLSWILALTLSMVSELSTSRVMVFPVRVLTKICIPPRRRNTKWRVDSFWIL*

>peptide 7 (53 aa)
MKSRLLLNVVVSQGTTILELLAGKDQPLLVRRNAFLVLDLSLDVVNGVGALNL*

>peptide 8 (89 aa)
MKGRLLLDVVISESTSILELLSGEDKPLLIRWDSLLVLNLGLDVVDGVGAFHLKGDGLSCESLNEDLHLLFTKDEDQYDRIENDWFIDL*

Sequence

>CNT3077383
AGAAGTAACAGCTAAGCAAAACAGCAAGTTTCACCGCATCTACAACGTAACCAAACATTTAAGAATAGAGTCGGCATGGAAACATTCGAATGGTCTTAAA
AGAGATAGGAAACAGAGGTCATCAATTATTTAATAGAGGCTTTATAACGCCTCAAACACACAAACCAACCATGATAAGTTTTAAAGAAAACGGAAGTAAA
AACGCAGACATTGTTGTTTCATGATACGACAAAGGACAAGAGACTTAAAAGCCACCACGGAGACGCAACACCAAGTGAAGGGTTGACTCCTTCTGAATGT
TGTAGTCGGCAAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATCCCTTCCTTGTCTTGGATTTTGGCCTT
GACGTTATCAATGGTGTCCGAGCTCTCCACCTCAAGTGTGATGGTCTTTCCGGTAAGAGTCTTCACAAAGATCTGCATACCACCACGCAGACGCAACACC
AAATGAAGAGTCGACTCCTTCTGAATGTTGTAGTCAGCCAAGGTACGACCATCCTCGAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCCGGAGGAA
TGCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCAACCTCTAGAGTAATGGTCTTCCCGGTAAGGGTCTTGACAAAGAT
CTGCATACCTCCACGTAGACGCAACACCAAGTGGAGAGTGGACTCCTTCTGGATATTGTAATCAGCGAGGGTTCTGCCGTCCTCGAGCTGCTTGCCAGCA
AAGATCAAACGCTGCTGGTCGGGAGGAATACCCTCCTTGTCTTGGATCTTAGCTTTCACGTTGTCGATGGTGTCGGAGCTCTCCACCTCGAGCGTGATCG
TCTTACCGGTGAGAGTCTTAACGAAGATCTGCATACCACCACGGAGCCTGAGGACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCAGCGAGAGT
ACGTCCATCCTCGAGTTGCTTTCCGGCGAAGATAAGCCTTTGCTGATCCGGTGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATGGTG
TCGGAGCTTTCCACCTCAAGGGTGATGGTCTTTCCTGTGAGAGTCTTAACGAAGATCTGCATCTGTTATTCACAAAAGATGAAGATCAATACGATAGAAT
TGAGAATGATTGGTTTATCGATTTGTGAAGGAGAAGAGGTGTTTAGGGTTTGATTTATACAAAGAGGATGAGGAAGACTCGGTCACGAGAAAGCTA