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Detailed information on CNT3076560


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30612441Brassica junceaArabis alpina3093.5183.68288reverse complement

Expression of CNT3076560

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MMENASLLYKNQLFHSQILVYLYQLSSIQKLS

>peptide 2 (62 aa)
SSLVSRACNPSGDDKVMGHWADLFGPDSERLSTGLPVPSRELSVRTRAKACGSDTLRAEETA*

>peptide 3 (37 aa)
MCRLDTGFHEMLTKMALFRSTYSIKLDVSGWCLFFLG*

Sequence

>CNT3076560
CGTCGAGCTTGGTATCGCGGGCTTGTAATCCAAGTGGAGACGATAAGGTGATGGGACATTGGGCCGATCTCTTTGGGCCGGACTCGGAAAGGCTATCTAC
TGGCCTGCCCGTTCCAAGTCGGGAGTTGAGTGTTCGGACTCGAGCGAAGGCTTGTGGTTCGGACACTCTTAGAGCGGAGGAGACTGCGTGAGGCTGGTTT
CACAGAGCAGCGTCCACCTCCCGCTTTCGACGGTGGAAGGATTACGGGCCGGTGCCTCCCAAGCCCACTATGACCCAATAAGCCGGCTCCAATTGGACCA
TCACTTTTTAATTTTTTTCACCACAAACTGGGCCAAAAGATCCATTACCAAAAAACCCTTAGACGAATCGTTTTCACTGTTCATCTTCTCTCCGATCTGA
CACAAACTGTTGTTGTAGGAGAAGTTAGATCCTTCGAGGCCGTTGAGCAAGAATAAGCATTGGGTTGTTGCTGAGATCATCAAGAAAGCTCGCATCTATT
CTCCTCAAGCCGCAGCCGCTGCTATTGCTGCTTCTGCATCAACTTCCTCGGCCTCCATTGCGGACTCTACTGCTCCATCCTCTACCTCTTAAGTTTTGTT
AGGAGTCTGCATGCATCGAGAAGGGAGATGTGTCGCTTGGATACTGGATTTCATGAAATGCTAACGAAGATGGCTTTGTTCCGATCAACATATTCGATCA
AACTTGATGTTTCAGGATGGTGTTTGTTTTTCCTGGGATAATGTAGTGAAAATGTTATGAATAGGAGTATTAGTAAACTCTCAGTTGGTGGTGAGCTTTT
GATGTCCTGTTACGTCATTTTCGTAACATATGTGCATGAATGAAACAATGAGTGAACCTTCTTGATGATGGAGAATGCTTCTTTGTTATACAAAAATCAG
CTTTTTCACTCTCAGATATTGGTATATCTATATCAACTGTCATCAATACAAAAATTGAGT