CANTATAdb - search

Detailed information on CNT3075855

BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LI74|CHUP1_ARATH, E-value = 2e-127

BLAST vs NONCODE: nothing found

Expression of CNT3075855

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MLDMLLPLNRKLMPIFIRRILLVQNIINRLRHHLKRRRNVIQRLTR*

>peptide 2 (44 aa)
TAKRNVDRFSISPIILLLASDELPVPGEIKEGEPSFFASRFISD*

>peptide 3 (66 aa)
MSYQFLERSKKVNHLSSLHVSSATDKTQQAQELCELYSRFPLLFQVLQEEAVEEGEAVDHHQAKEV*

Sequence

>CNT3075855
ACTGCTAAGAGGAACGTTGATCGGTTCTCGATCTCCCCAATCATATTGCTCCTAGCTTCAGATGAGCTACCAGTTCCTGGAGAGATCAAAGAAGGTGAAC
CATCTTTCTTCGCTTCACGTTTCATCAGCGACTGATAAAACTCAACAAGCTCAGGAGCTCTGTGAACTTTACTCCCGCTTCCCGCTCCTCTTCCAAGTGC
TCCAGGAGGAGGCGGTGGAGGAGGGGGAGGCGGTGGACCACCACCAGGCAAAGGAGGTCTAGGGGAAGGCACATTAGTGCTCTTACCACCTCCAGCTGAT
CTTGGAGGCGGGCGAGGCACTCTAGGAGGTCGTTTCTCAATATCCACAAGCTTCATTTTCGCCACGGCTTGCGCGTTTTCGCTAGCTTTACCATCGTTGT
TGCCGTCACTAGACTGATCACTTGCGGTAACCGTCCTGGTCAAGGAGGGAACCGAAACTGGCTTCTCCTTGAGCTGAGCAAGTTTAGGAGGCAAAGCCAC
ATTACCTCCAAACCTCTCAGCTCTCGCTTGATCTGCCTTATGCTTGATATGCTTCTCCCTCTCAACCGCAAGCTTATGCCTATCTTTATACGCAGGATAC
TTCTCGTCCAGAACATTATCAACCGACTTAGACATCACCTGAAACGACGCCGCAACGTTATTCAAAGGCTCACCCGGTGAAGAAGCTTGTTGCTGTGTTC
TGATTCTCGGCAGATTCGGAGTCTCAGGTGTACCAGGACTTTCTTGATCCACTTTACCAAAAGTCGTTATAGCTACTGATTCACCAGCGTTTCTAATCAT
CAGAGACTCCAAAGGACCTCTCTGTTTATTCATACTCACGCTAAGTCTCCCAGGTGATCCTCCATAGAACGATCTCGAAGGAGAGGACTGAACGCTTGAA
TCATCTTTACTTTTACCGCCC