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Detailed information on CNT3075737


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30371574Brassica junceaArabidopsis thaliana12.8521.0885.32109forward
CNT30525128Brassica junceaPhaseolus vulgaris12.6224.8382.24107forward
CNT30540845Brassica junceaBrassica napus12.522.3694.34106forward
CNT30313614Brassica junceaCamelina sativa11.7925.7789100forward
CNT30620828Brassica junceaCajanus cajan12.2647.4983.65104forward

Expression of CNT3075737

Peptides detected in this lncRNA

>peptide 1 (45 aa)
QGFGVPFCDWKIRVANDLLLSFCIKDQTKRNRRHIPRTFFKEKCT*

>peptide 2 (44 aa)
MHRNKSPGVINSPQCLWSPFTIRCGSPSASHRCPYSEQRRRQLGL

Sequence

>CNT3075737
CTCAAGGGTTCGGAGTTCCCTTCTGTGACTGGAAAATCAGGGTAGCCAACGATCTCCTACTATCATTTTGCATAAAGGATCAAACAAAGAGAAATCGCAG
ACACATCCCAAGAACATTTTTCAAAGAAAAGTGTACATAAGTATAGTGATGTGTTTCATCTGGTGTTGAAACTGTCCCAGACACAGTACTTAATCTTTAT
ATCTCTGTCATCATTGTCGCCATGCTATCAGCTGACCACACATATAAAATACACAGCAATGTTATAACCATGTTTGTTGCCGCCTAGCTCCTTCTACGTT
ATAAGCTCGTTGAATAAAGAGTTTCTAAGTTCTTCTAAAGAACGTCCTTCTATATCCGAAAACCATAAAACAATGCAAAATATATCAGTACTCAGAAGGC
GATTCATTTTCTTTAGAAACAATTCATCAAACATGTAATAAACATTTAGTTCTAAGAATATTTATAAAAACCGTAAATCATAAGCAGAGGTATAACACAG
TATCAAGCTGAACTTTTCATTGATTTATAAACAGCTAAAATTTAGGCCAAGATTGGAAATCATTACAAATGGTTTCTTCTCCAAAATGTTAGTCAAGAGC
CCGTAAGCTTTGTCTCCGCCACGGAATCTTCTACCCGTGCTACCGGCGTATCCTTATCCTCTGTGCTGTTTCCACTTCTAGCTTCTCCCCACCCACCCGA
TCCATCCTGCGATGCACAGGAACAAAAGTCCTGGTGTTATAAACTCTCCCCAATGCCTCTGGTCTCCGTTCACTATCAGGTGTGGTAGCCCGTCTGCATC
GCACAGATGCCCGTACTCAGAGCAACGAAGGAGACAGCTAGGGTTAGC