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Detailed information on CNT3074958


BLAST search results

BLAST vs Swiss-Prot:
sp|P05346|RBS1_BRANA, E-value = 2e-77

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30377715Brassica junceaArabidopsis thaliana44.3736.3185.49386forward
CNT30261239Brassica junceaBrassica rapa69.4376.4697.35604forward

Expression of CNT3074958

Peptides detected in this lncRNA

>peptide 1 (97 aa)
MFRSKKNFYFYYLQLEFNTRNPLVAEKVVDFLTQFNFGKVRKVREGLKLLLSNWWPHLRNLTLPPLLTMEVMSLLALRVTGNAEEDFKPVNGATMVA*

Sequence

>CNT3074958
GTAAAAATTGATAATAACCATCGGTAACCAAGAAGAAAATATGCAATATAGAGATTACATGTTCATAAATCAGACACTTGACAATCCGATATAACATGCC
TCAGAAACAAAAAGCCAAAGAAAACAGACAAATGGAAATGAAATGAGTAGATATTATTTATGAAATGTCTTACAACGCGAATTAAGCACCAGTGAAGCTT
GGTGGTTTGTAGGCGATGAAACTGATGCACTGGACTTGACGGTTGTTGTCGAATCCAATGATCCTGATGAAGGCGTTAGGGTACTCCGTTTTGCACTCTT
GGACTTCCTTCAACACTTGAGCAGAGTCGGTGCATCCGAACAAGGGAAGCTTCCACATTGTCCAGTAACGGCCATCGTAGTATCCGGGGGTGCTTCCGTG
CTCACGGTACACAAATCCATGCTACACACACATGAGAATTCCAATCAAAATCAGGATTGAGATTATGTAATAAAAGATGTTTAGATCCAAAAAAAACTTC
TATTTTTATTACCTCCAACTCGAATTCAACACAAGGAATCCACTTGTTGCGGAGAAGGTAGTCGACTTCCTTACCCAATTCAACTTCGGTAAGGTCAGGA
AGGTAAGAGAGGGTCTCAAACTTCTTCTTTCCAACTGGTGGCCACACCTACGAAACCTAACTCTTCCTCCGTTGCTAACGATGGAGGTAATGTCATTGTT
GGCCTTGCGGGTGACTGGGAATGCAGAGGAAGACTTCAAGCCGGTGAATGGAGCGACCATGGTGGCTTGAGCCGGTGAGGTAACCACAGCAGCGGAGGAA
AGCATAGAGGAAGCCATTACTACTTCTTCTTCTTCTTCTTCTTCTTCTTTTCTCTTAACTTACTTGTTTG