Detailed information on CNT3074464


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30631133Brassica junceaVigna unguiculata20.0512.9792.7783forward
CNT30538256Brassica junceaBrassica napus93.4893.7100387forward
CNT30260341Brassica junceaBrassica rapa94.297.9999.49390forward
CNT30611888Brassica junceaArabis alpina24.8821.1198.06103forward
CNT30704139Brassica junceaPrunus avium20.0516.4492.7783forward

Expression of CNT3074464

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MFLLDQAMISIRILMFITWKNPRLGSRFILFIFYSLLIIVVR*

Sequence

>CNT3074464
GGGGTTAGATGCATATAAAAGAGTAAGCTGACCATCAAAATCTATCTAGCTACTCCGCCGCTTTTCTCATTTGCTTAGATCTAAAACCCCATCCAGAGGA
GGGAAAGGGTGAATCTTCTGAGGCAACCAGCATGAGGGCTAAGTGGAAGAAGAAGCGTATGAGGAGGTTGAAGAGGAAGAGACGAAAGATGAGACAGCGA
TCTAAGTAGTTTCGTAACCTGTTTTTGTCTCTTTACCGACATTTGTGAGAGTTTTGTTGGTTTTCTGTCTACATTTTAATGTTTTTGTTGGACCAAGCTA
TGATTTCAATCAGAATACTTATGTTTATTACATGGAAGAATCCACGACTTGGTTCTCGATTTATCCTCTTTATTTTCTACAGTCTGCTTATAATCGTGGT
TAGATGAATGATGA