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Detailed information on CNT3074412


BLAST search results

BLAST vs Swiss-Prot:
sp|P12332|CB21_SILLB, E-value = 1e-83

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30625449Brassica junceaDaucus carota32.4421.0985.05194forward

Expression of CNT3074412

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MSLGQRRARRCPSRSLRGILRLGRMVCSRRTVPSTWD

Sequence

>CNT3074412
TTGTGCAATAAGAAGTCTTGTTTTTATTCATTCATATGCCAAATATCCATTCAATGAAAAGAGCCAGTCACTAAGTAAATAGACACGAACAATACATTAA
CGGGTTTTACAAAGTAGATAAGATAGTGAAGCAAATCCATACAATAATTAAATTACTTTCCGGGGACAAAGTTGGTAGCGTAAGACCAGGGTAAAGCGGG
TCAAGACCTTCTCCGAGAGGACCACCTCCGATTCTGTACCCTTCGATGAGGCCCATGAGCACAACTTGACAAGCCCATATGGCTAAGATGCTTTGCGCGT
GGATCAAGTTAGGGTTTCCGAGGTAATCGAGGCCTCCTTCTGAGAAGATCTGGGATCCTGCCTTGAACCACACGGCTTCTCCGAATTTGACTCCGTTCTT
GGAGAGAATCTCGGGGAATGTGCAGCCTAGAGCTCCCAGCATTGCCCATCTGCTGTGGATTACTTCGAGCTCACGGTTCTTAGCGAATGTCTCTGGGTCA
GCGGAGAGCCCGGCGGTGTCCCAGCCGTAGTCTCCGGGGTATTCTCCGGTTAGGTAGGATGGTGTGTTCTCGGAGAACGGTCCCAAGTACTTGGGACG