Detailed information on CNT3073112


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30265164Brassica junceaBrassica rapa99.7282.7699.17360forward

Expression of CNT3073112

Peptides detected in this lncRNA

>peptide 1 (54 aa)
SCGSTPASTAREWEPAGRQIYPCCSTLSSLTASRSNQSVCKTRNGSEARRLWLL*

>peptide 2 (29 aa)
PVAQHQRPQLGSGSQQVDKFTLVAQHFRP*

Sequence

>CNT3073112
TCCTGTGGCTCAACACCAGCGTCCACAGCTCGGGAGTGGGAGCCAGCAGGTAGACAAATTTACCCTTGTTGCTCAACACTTTCGTCCCTAACGGCTTCCC
GATCCAATCAGAGTGTCTGTAAAACCCGAAACGGTTCTGAAGCACGCCGTCTTTGGTTACTTTAACTGGCTTCATCACGTCGTGTCTCTCGTAAACGATG
ACCAAGTCTCCATCTTCGATGCATCTCTTGAAAGATAAGGCCTTCTTTGACTCAGTTGGTAGCATCTTGAGAATCAGCTAGGAAGATGAAGAAGAGGAAG
AAGCTTCGAACTCGAAGTGACGACAATGGAGTTTATGTGATTTGTAAGAACAAATCTAATC