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Detailed information on CNT30730551


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004400, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30212627Corchorus capsularisHelianthus annuus95.2694.7994.82965reverse complement

Expression of CNT30730551

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MCRPSQTPHLTMSSARIDRQMPVLGLKRGA*

>peptide 2 (91 aa)
GRDESKRQRAESQWIVAARPLCHLQYPVAYLSRLQRILPAARWELRFKEACTAHPPHGLLLRHVPLGAKGPYCGSAIGRRAQASLLARILT*

>peptide 3 (41 aa)
MIGRADIEGSKSNVAMNAWLPQASYPCGNFSDTSSLQIPKV*

>peptide 4 (31 aa)
GGGTNRSDKGLNLSGSWQQGHSATYNTPSRI*

Sequence

>CNT30730551
GGGGGAGGGACGAATCGAAGCGACAAAGGGCTGAATCTCAGTGGATCGTGGCAGCAAGGCCACTCTGCCACTTACAATACCCCGTCGCGTATTTAAGTCG
TCTGCAAAGGATTCTACCCGCCGCTCGGTGGGAATTACGCTTCAAGGAGGCCTGCACGGCTCATCCGCCGCACGGACTACTCCTACGACACGTGCCCTTG
GGGGCCAAAGGCCCCTACTGCGGGTCGGCAATCGGGCGGCGGGCGCAAGCGTCGCTTCTAGCCCGGATTCTGACTTAGAGGCGTTCAGTCATAATCCAGC
GCACGGTAGCTTCGCGCCACTGGCTTTTCAACCAAGCGCGATGACCAATTGTGCGAATCAACGGTTCCTCTCGTACTAGGTTGAATTACTATTGCGACGC
GGCCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAATTCTGCT
TCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGA
CACCTCTAGCTTACAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTCGTACTGGAAATCAGAATCAAACGAGCTTTTACCC
TTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGAC
AATGTCTTCCGCCCGGATCGACCGACAGATGCCGGTCTTGGGTCTAAAAAGAGGGGCGTAGCCCCGCTTCCGATTCACGGAATAAGTAAAATAACGTTAA
AAGTAGTGGTATTTCACCGTTGCCGAAGCTCCCACTTATACTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTT
TCCCCGCTGATTC