Detailed information on CNT30730547


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30619071Corchorus capsularisSesamum indicum68.53100.7790.69784forward
CNT30283133Corchorus capsularisChenopodium quinoa61.2885.4991.44701forward
CNT3089447Corchorus capsularisVigna radiata71.8577.1190.63822forward

Expression of CNT30730547

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MCASQRARKPVRRKEADWWDPSRVHRRPTLIF*

>peptide 2 (33 aa)
MRLGRMWNGESRSADRLGAWTDADCGGGPSPGS*

>peptide 3 (41 aa)
MNKTLWRRYVDARNATPGQAGLPAEFKHINKRRKRNLQGFP*

>peptide 4 (40 aa)
MQPQSGGKFRPRLNTGERPIANKYREGKMKRTLKRESKSA*

>peptide 5 (46 aa)
IMASRALWLAVGLNSQSSAIMVPRPLVVMLFARPGRVRPLSWWTNE*

>peptide 6 (44 aa)
MSTLAMRPQVRRDYPLSLSISISGGKETYKDSLSNGERTGKSPA*

>peptide 7 (77 aa)
MGAGDAPRSDVERREPVRRSTRGVDRCGLWRRPKPGLLIRLWRRRRLDRGQQHAPSRRASAPACSRHRPVGSPFGPS*

>peptide 8 (70 aa)
MRIVAAAQARALDTPVETSSPRSWPAARAVSACLGTCVLPASACGLPIRPVLKHGPRSLTCVRVNGLENP*

Sequence

>CNT30730547
ATAATGGCCTCCCGTGCGCTATGGCTCGCGGTTGGCCTAAATAGCCAGTCCTCGGCGATCATGGTGCCGCGGCCTTTGGTGGTAATGCTTTTTGCACGCC
CCGGTCGCGTTCGCCCATTGTCTTGGTGGACCAATGAATAAGACCCTATGGCGTCGATATGTCGACGCTCGCAATGCGACCCCAGGTCAGGCGGGATTAC
CCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTTACAAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGCTTGAGAATCGG
TCGCCCTCGGCGTCCGAATTGTAGTCTGGAGAAGCGTCCTCAGCGGCGGACCGGGCCCAAGTTCCCTGGAAAGGGGCGCCGGAGAGGGTGAGAGCCCCGT
CGTGCCCGGACCCTGTCGCACCACGAGGCGCTGTCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCCGTCCAAGGCTAAATAC
GGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCGGA
TGGGGGCCGGCGATGCGCCTCGGTCGGATGTGGAACGGCGAGAGCCGGTCCGCCGATCGACTCGGGGCGTGGACCGATGCGGATTGTGGCGGCGGCCCAA
GCCCGGGCTCTTGATACGCCTGTGGAGACGTCGTCGCCTCGATCGTGGCCAGCAGCACGCGCCGTCTCGGCGTGCCTCGGCACCTGCGTGCTCCCGGCAT
CGGCCTGTGGGCTCCCCATTCGGCCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGCTAGAAAACCCGTAAGGCGTAAGGAA
GCTGATTGGTGGGATCCCTCACGGGTGCACCGCCGACCGACCTTGATCTTCTGAGAAGGGTTCGAGTGAGAGCATGCCTGTCGGGACCCGAAAGATGGTG
AACTATGCCTGAGCGGGGCGAAGCCAGAGAAAGCTCTGGTGGAGGCCCGCAGCGATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGAAA
GACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCGAAGTTTCCC