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Detailed information on CNT30730493


BLAST search results

BLAST vs Swiss-Prot:
sp|Q0ZJ23|PSBZ_VITVI, E-value = 3e-22

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30201938Corchorus capsularisPisum sativum33.5112.4889.68126forward
CNT30188310Corchorus capsularisSecale cereale30.3214.3889.47114forward
CNT30551174Corchorus capsularisOryza brachyantha27.3935.2787.38103reverse complement

Expression of CNT30730493

Peptides detected in this lncRNA

>peptide 1 (96 aa)
YIYNIISNFIFYFFNYFLFIHHSNSIYFISFKLKITEVWLMTPPLIFLFSILATYTSILLNLNMSQNLRNSWEGSFLDPERVDSRNKRIKDTHQKN*

Sequence

>CNT30730493
AATATATATATAATATAATTTCTAATTTCATTTTTTATTTTTTTAATTATTTTCTTTTCATTCATCATTCAAATTCTATTTATTTTATTTCATTCAAGTT
AAAGATTACAGAAGTTTGGCTGATGACCCCCCCTCTCATTTTTTTATTTTCCATTTTGGCAACTTATACTTCTATATTATTGAATTTGAATATGTCTCAA
AATCTGAGAAATTCGTGGGAGGGGTCATTTTTGGATCCGGAACGGGTAGATTCAAGAAATAAGAGAATTAAGGATACCCACCAGAAAAACTAATCCAATC
CATAAAGATGTACCGGAAAATACAATATTTTTATTACTCGACCAACCATCAGGAGAAGCAAATACAACAGGTACAC