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Detailed information on CNT30730480


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONVVIT003033, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696398Corchorus capsularisOryza sativa38.199.1797.06477reverse complement
CNT30671914Corchorus capsularisSetaria viridis64.3848.4795.41806reverse complement
CNT30641383Corchorus capsularisNymphaea colorata49.1219.6992.68615reverse complement
CNT30378673Corchorus capsularisArabidopsis thaliana30.6730.7994.27384forward
CNT30592527Corchorus capsularisMusa acuminata15.156.5998.41189reverse complement
CNT30234026Corchorus capsularisBrassica oleracea29.3992.794.84368forward
CNT30511493Corchorus capsularisSolanum lycopersicum24.233.8999.34303forward
CNT30555751Corchorus capsularisOryza glaberrima20.1335.3490.08252forward
CNT30147391Corchorus capsularisMedicago truncatula86.6642.8996.131085forward
CNT30258698Corchorus capsularisAvena sativa33.2351.4998.08416forward
CNT3082633Corchorus capsularisBrassica juncea25.1695.7497.14315reverse complement
CNT30363124Corchorus capsularisSorghum bicolor18.37101.3290230reverse complement
CNT30595572Corchorus capsularisOryza meridionalis21.4931.3995.91269reverse complement
CNT30434643Corchorus capsularisPapaver somniferum60.46101.7594.45757reverse complement
CNT30118490Corchorus capsularisCitrus clementina7.4320.9994.6293reverse complement
CNT30550626Corchorus capsularisOryza brachyantha24.12103.0790.73302forward

Expression of CNT30730480

Sequence

>CNT30730480
CCCACTTCAGAGTCTTCGCCTTTAGATAACAAAAAGTGTCCGCCCAGGTCGCCAAACTACGACGAGAGTTTCGCCTTTTGAAGCGCCAGTCGCGTAGGGC
GACCGGGCCATGCCGAGTCAGAAAGGCTTTGATGACTCAAGGTGAATATTAGGGAAAGGAGAGTGAGGGGAAGAGGTCTTTGCCGAGAACCTCGGCCCGA
TCATCCATCCAATTCGCTCCAACAGACAGGCATGGTTCTGTAGTCAAAGCAACTTCGTCACTTTCGTGTACCCATCGGACGGCAGCCCTTTCGGGGGTTC
CTTAGGGACCGATTCACTCTGCGTAGATTGACTGAACGCAGAAAGCCTTCCACTGGCAGGCGATCGTGTTTTTCACAGGATTTCTCGTTACTCATGTCAG
CATTCTCACTTCTGATATCTCCAGGTGTTGTTACCAAAAACCTTCCCCGATTGACAGAACGTCCCGCTACTGACACTTGAAAAAGCTGCTTTCAAGGTCT
CGTCGCTTCGGTGAATCACTTGAGCCCTGATACATTTTCGGTGCCATGGAGCTAGACCAGTGAGCTATTACGCTTTCTTCAAAGGATGGCTGCTTCCAAG
CCCACCTCCTGGTTGTCATCGCTCGATCACTTCCTTTTCCACTAAGTGATTGCTTAGGGACCTTAGCGTACGATCTGGGCTGTTTCCCTCTCGACTTTGG
ATCTTAGCACCCCAAAAGTCTGTCTGTACAAACGATCTAGGCCTGTATTCGGAGTTTCCCTGGGGTTGGTAAGGCGAAATGGGGCCACCCTAGCCCATTG
AGTGCTCTACCTCGGGCCATCGACATCATACGCTCTACTGAAATAGATTTCGCGGAAAACCAGCTATATCCGATCTTGGTTGGCCTTTCACCCCTAGCCA
CAAGTCATCCCCGTATTTTGCCACATACGTGGGTTCGGTCCTCCAAGGCCTGTTAGAGCTCTCTTCAACCTGCTCATGGCTAGATCGATCGGTTTCGGGT
CAAATAGGAAGAACTAGAAGATTCCACCTCTGGAAAGCGCCTACACCTAATGGCTTAAGCCGCTCTTCCCATTTACTCGCTGACCCATCATGCAAAAGGT
ACGCCGTTAGAGGTTGTGCGCTTTACTAATAGAAAGTAAAGGCTATAAGCTCCCCTCCTTCGACTGATTGTTCGCATCGGATCTCAGGTTCTCTATTGCA
CTCCCTAACATAGGGTTCTTTTCACCTTTCCCTCACGGTACTTGTACGCTAT