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Detailed information on CNT30730474


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30607170Corchorus capsularisGossypium raimondii26.2122.5493.25163forward
CNT30204699Corchorus capsularisHelianthus annuus10.2922.5495.3164reverse complement

Expression of CNT30730474

Peptides detected in this lncRNA

>peptide 1 (71 aa)
MGFINFFLGLCSTPSKDLPDFDLHIIVQMTQYHVFLLGFHLLFILHIIRLINCLKSLLYYNFEIKKIMIMI*

>peptide 2 (32 aa)
MHTVQQKLRKKSMCRFQPSFVFYSGFFLTYNF*

Sequence

>CNT30730474
CTTCCGTCTCGACCTCTTGACCTAAAAAAAGTACTCTATTTCGATAAAGTAGGTTGATTAAGAATTAGGATATGATTAGGAATTAGGATAAAATTGTATT
CCTTAGTAGCCGTACAGGCACCTTTTGATGCATACGGTTCAACAAAAATTGCGAAAAAAATCAATGTGTAGATTCCAGCCATCCTTCGTTTTTTATAGTG
GGTTCTTTCTAACTTATAATTTCTAATGAAGTGGCTTTTTCTTCTTTATCAACTTCATTTTAATTAAAGTAAAGATGAGTTTTGGCCTGTTTTCCTATAA
TATAGAAAAAATTTGCTAAACTTATCGTACAAACTTTTCATTGATATATTTTTTTCATTGGGATTCAATCCAAGCCACGATATCATTTTCTTGTTCTTGA
ATGGGTTTCATCAATTTTTTTTTAGGTTTATGCTCTACTCCGAGTAAAGATCTGCCCGATTTTGATTTGCACATTATAGTACAAATGACCCAATACCATG
TCTTTTTGCTAGGATTTCATTTACTTTTCATATTACATATTATTCGATTGATTAACTGTTTGAAATCACTCCTATATTATAATTTTGAAATAAAAAAAAT
TATGATAATGATATAGGTGGTA