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Detailed information on CNT30730384


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618587Corchorus capsularisSesamum indicum87.43100.195.811050forward

Expression of CNT30730384

Peptides detected in this lncRNA

>peptide 1 (66 aa)
MEQCRQGKSAKWIRNLGKRIGSEGWARGSQSRTRRLSADCSSCFRGESGSPRAGRGTDWERSLRGPS

>peptide 2 (40 aa)
MNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV*

Sequence

>CNT30730384
GACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGAG
CCCTTAGCGAGTTCTATCGGGTAAAGCCAATGATTAGAGGCATCGGGGGCGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGCGCGGC
TGCTTTGTTGAGCCGTGCCAAGGAATCGAGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCGGGTTACGGTG
CCCAACTGCGCGCTAACCTAGAACCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACA
ACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTTAAGCGCGCGACCTATACCCGGCCGTCGGGGCAAGAGCCAGGCCTCGATGAGTAGGAG
GGCGCGGCGGTCGCCGTAAAACCCGGGGCGTGAGCCCGGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGA
AGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCTAAGAGACGGGGGAAGCCCGTCCGATAGCGCGCAAGCGCGAG
CTTCGAAAGGGAATCGGGTTAAAATTCCTGAACCGGGACGCGGCGGCTGACGGCAACGTTAGGGAGTCCGGAGACGTCGGCGGGGGCCTCGGGAAGAGTT
ATCTTTTCTGTTTAACGGCCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCAGCGGCCGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCG
CCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCGTCCGCGCCCGGTCGTACTCATTAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGTCGA
TGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCACGGGGGTCCCAGTCCCGAACCCG
TCGGCTGTCGGCGGACTGCTCGAGCTGCTTCCGTGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACTGGGAACGGTCCCTTCGGGGGCCTTCC
C