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Detailed information on CNT30729972


BLAST search results

BLAST vs Swiss-Prot:
sp|O22914|CP121_ARATH, E-value = 7e-31

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674439Corchorus capsularisSetaria viridis20.1449.3684.48116forward
CNT30523223Corchorus capsularisSetaria italica23.2626.9185.07134forward
CNT30617555Corchorus capsularisSesamum indicum2523.9282.64144forward
CNT30710175Corchorus capsularisGlycine max22.9233.3382.58132forward
CNT30387749Corchorus capsularisTriticum turgidum23.2621.0485.82134forward
CNT30246479Corchorus capsularisAvena sativa21.1818.3582.79122forward
CNT30659185Corchorus capsularisTriticum dicoccoides23.2625.1485.82134forward
CNT30216686Corchorus capsularisKalanchoe fedtschenkoi31.9432.0682.07184forward
CNT30620908Corchorus capsularisCajanus cajan24.3119.7285140forward
CNT30580322Corchorus capsularisEchinochloa crusgalli23.2625.3883.58134forward
CNT30557621Corchorus capsularisPanicum hallii25.1726.4184.83145forward
CNT30723703Corchorus capsularisLupinus angustifolius31.2524.9781.67180forward

Expression of CNT30729972

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MYRKNALNYQISRIYGIGLHHYITSRPPINMFSFT*

Sequence

>CNT30729972
CTAAGATGAAATAGATATACACTCTTTTTGGCCAAAAAAAAAAGATATACACTCCTGAATATATCTATCTATATACTCACGTTGATTGCTATGATTAGAT
CGAGTTCCAAAATTATAACGGCATAATAGTTCATGTATAGAAAAAACGCTTTAAATTATCAAATTTCCAGAATATATGGTATAGGATTACATCATTATAT
AACGAGTAGACCACCAATTAACATGTTCAGTTTCACATAAACAAGGAGGCTTACATACAACATCTAAAAGCTCCTGTATCATCCATCAATACCACCACAT
AAAATCCCCCGCCATATTCATCATCGAAGGTTCTAAAACCTTATCATCATAAACTAATTAAAGAAAAAGAAAGCGATTTTCAATTATCATAAGTGCGGCA
CTCATCTGTCTCAGGGTTCTCTTTGCAGTAGTTCTCCAAAGGGTCGTTGTTTGCTTTCTGCCTGTCCCTGGCGTGGCTGGCGGCGGCGCTGAGCTCCTCC
ACCTCGTCCCAAGCCGCCACGCACTCTGAGCTCGCTGGGTCACCTGAGCATGCCTCCTCGGCTTCCTTGATGCTCT