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Detailed information on CNT30728105


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 4e-101

BLAST vs NONCODE:
NONGMAT000502, E-value = 4e-55

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30723825Corchorus capsularisLupinus angustifolius43.4852.1784.46457forward

Expression of CNT30728105

Peptides detected in this lncRNA

>peptide 1 (57 aa)
MRRCWSGGIPSLSWILALTLSMVSELSTSRVIVFPVRVFTKICIFQKENHKKAKVFD*

>peptide 2 (80 aa)
MKGRLLLDVVIGQGTAVLELFSGEDETLLVGRDPFLVLDLGLDVIDGIGTLDLESYCLSGEGFHEDLHLSERKSQKSKGF*

Sequence

>CNT30728105
AGCTCCCTCCAATGGCTTCCAGTATTGAAAGGAAATTATAATTGAGATATTATGTTCAAATGAAAGATAATTAAACAGTGAAGAAAAAGAGAAGCATATG
CGGAAAAACACCAACTTTTATTCCAGAGCAGGTAATTAGATTACCATTACACGATACTTAAAAAAGACCCAGAAATTAACTAAAAGCAAAAACATAGACC
AATGAGCGATTCAATTAAGGCTCATTACACAGACAATCTTAAAACTTGAAACTTTAAAGCAAAGACAGACTCTTTCATTGAGAACAATCACTGCCCACCA
CGGAGACGAAGAACAAGGTGAAGGGTAGACTCTTTTTGAATGTTATAATCAGCTAGAGTCCTTCCATCTTCCAATTGCTTCCCTGCAAAGATAAGCCTTT
GCTGATCTGGGGGAATCCCTTCCTTGTCCTGAATCTTTGCCTTGACATTATCAATTGTATCAGAACTTTCAACCTCCAGGGTGATTGTTTTCCCTGTCAA
GGTCTTAACGAAAATCTGCATACCTCCCCTGAGCCTCAAGACAAGATGAAGGGTCGACTCCTTTTGGATGTTGTAATCGGCCAAGGTACGGCCGTCCTCG
AGCTGTTTTCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATCCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTATCGATGGTATCGGAACTCTCGA
CCTCGAGAGTTATTGTCTTTCCGGTGAGGGTTTTCACGAAGATCTGCATCTTTCAGAAAGAAAATCACAAAAAAGCAAAGGTTTTTGATTGAATTTTGAG
AATAGAGAATCGAGAGAGAAAGCAAAGAAATTAGGTTTTCTTTGTTTGGATGAGAGAAAAGGGAAGGCGAAGGGCTGCTTTTATAGGGAAAGGAAATCGT
GACCGACTCGAAATAGGAGTTTGGGAATCTTAATTCCAAAGGGAAAGGGAAAAGAAAAGTCCGGAAAAGGCGAGAAAATTGCGGTCATATGAGTCGGCGT
AACGTTAACCACTCGTTTACTATTTTTTTATTTGTGATTTTTTTTAAAGCC