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Detailed information on CNT30727740


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30698009Corchorus capsularisQuercus lobata47.0445.9884.62143reverse complement
CNT30212924Corchorus capsularisHelianthus annuus47.0446.8981.82143forward
CNT3029804Corchorus capsularisTheobroma cacao55.9255.3789.41170forward

Expression of CNT30727740

Peptides detected in this lncRNA

>peptide 1 (41 aa)
PSLVTRACDPSVGNNVVGHWFDSLSRVQRGPSVACPFQAMS*

Sequence

>CNT30727740
GCCGAGCTTGGTAACGCGAGCTTGTGACCCTTCAGTGGGCAACAATGTGGTGGGACATTGGTTCGACTCTCTGAGTCGGGTCCAACGTGGTCCATCGGTG
GCTTGCCCGTTCCAAGCCATGAGTTGAGCCATGGGACTTAAGTGAAGACTCTGGTCTCGTGGCTCCTAGAGTGGTGGGTACTGCGTGAGGTTGGTTTCAC
AGAGCCAGCGAAGACCACCCGCTCTTGGCAGTGGAAGGATAACACGCCTTACCCACTTGGATCCAACATGGCCCAGTTACCATCTTCTTTTTGCTTTCTT
TCTG