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Detailed information on CNT30727608


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30709197Corchorus capsularisGlycine max21.138.886.5982forward
CNT30354594Corchorus capsularisLactuca sativa21.6512.7583.3384forward

Expression of CNT30727608

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MPKHWSSWLPFSCKMGFFLVYLLLIMNYGAEMNWPFFFPFEN

>peptide 2 (35 aa)
LCKILATSEVLRELAGAKLNCVCPGKLCSSQGTHQ*

>peptide 3 (32 aa)
MPWQTLLFSRYSSMTPAFAEEAAAVVKRVAAK*

Sequence

>CNT30727608
TGCTTTGCAAGATCCTGGCAACCAGTGAAGTTCTCAGGGAACTTGCAGGTGCCAAATTGAACTGTGTATGCCCTGGCAAACTTTGCTCTTCTCAAGGTAC
TCATCAATGACTCCAGCATTTGCAGAAGAAGCAGCAGCCGTGGTGAAAAGGGTAGCTGCCAAATAAAGCATAGCAGCTCTTCTTCCTTCAACAGCACCTG
ATTCCTTGGGAACTTTGGCTTGTTGGGCTCTGATCACAGTTCCTGAGATAGCATAGTTGCATGCCAAAACACTGGAGTTCATGGCTGCCATTTTCCTGCA
AAATGGGGTTCTTTCTTGTTTACTTACTACTAATAATGAATTATGGAGCTGAAATGAATTGGCCTTTCTTTTTCCCCTTTGAGAATCC