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Detailed information on CNT30727322

BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 0.0

BLAST vs NONCODE:
NONTPRT002153, E-value = 1e-132

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30528977	Corchorus capsularis	Eucalyptus grandis	72.46	68.73	84.15	921	forward
CNT3019984	Corchorus capsularis	Citrullus lanatus	72.23	60.51	82.14	918	forward
CNT30629220	Corchorus capsularis	Vigna unguiculata	66.72	78.52	82.19	848	forward
CNT30635990	Corchorus capsularis	Capsicum annuum	72.38	44.38	82.72	920	forward
CNT30568725	Corchorus capsularis	Actinidia chinensis	71.68	78.53	82.44	911	forward
CNT3086353	Corchorus capsularis	Vigna radiata	69.47	41.2	82.79	883	forward
CNT30172216	Corchorus capsularis	Trifolium pratense	71.83	53.58	84.01	913	forward
CNT30312626	Corchorus capsularis	Camelina sativa	69.87	68.52	82.32	888	forward
CNT3077383	Corchorus capsularis	Brassica juncea	71.83	70.45	83.46	913	forward
CNT30264722	Corchorus capsularis	Brassica rapa	71.83	86.29	82.91	913	forward
CNT30229013	Corchorus capsularis	Ananas comosus	71.83	57.89	84.67	913	forward
CNT30217431	Corchorus capsularis	Kalanchoe fedtschenkoi	71.83	67.43	83.68	913	forward
CNT30127456	Corchorus capsularis	Corymbia citriodora	35.48	56.8	89.58	451	forward
CNT30716337	Corchorus capsularis	Malus domestica golden	72.31	74.17	85.2	919	forward
CNT3032244	Corchorus capsularis	Theobroma cacao	73.41	81.2	87.35	933	forward
CNT30324534	Corchorus capsularis	Asparagus officinalis	65.3	64.89	83.37	830	forward
CNT30174705	Corchorus capsularis	Vigna angularis	71.68	58.89	83.97	911	forward
CNT30111771	Corchorus capsularis	Ficus carica	69.32	70.71	83.54	881	forward
CNT30334097	Corchorus capsularis	Cynara cardunculus	70.42	81.44	82.79	895	forward
CNT3066362	Corchorus capsularis	Selaginella moellendorffii	71.75	92.49	82.68	912	forward
CNT3051129	Corchorus capsularis	Cucumis sativus	65.77	94.46	85.41	836	forward
CNT30114596	Corchorus capsularis	Eutrema salsugineum	72.15	88.77	82.66	917	forward

Expression of CNT30727322

Peptides detected in this lncRNA

>peptide 1 (47 aa)
KWRLYIIFLKQRTQERHSIGDCKLRLIKEQRIGPNLQILFKINHYIT*

>peptide 2 (79 aa)
MKGGFLLDVVIGQSSAVLELLPGEDKPLLVWGDPLLVLDLGLDVVDGVGALDFEGDGFSGQGFDKDLHTATETEDKVKG*

>peptide 3 (40 aa)
MVSELSTSRVMVFPVRVLTKICIPPRRRRTRWRVDSFWML*

>peptide 4 (40 aa)
KMATLYHLSETENTRKAFDWRLQIKINQRTENWAKFANFI*

>peptide 5 (33 aa)
MVSELSTSRVMVLPVRVLTKICILFGWLRRKNR*

>peptide 6 (31 aa)
MVSELSTSRVMVFPVRVLTKICIPPRRRRTR*

Sequence

>CNT30727322
AAAATGGCGACTTTATATCATCTTTCTGAAACAGAGAACACAAGAAAGGCATTCGATTGGAGACTGCAAATTAAGATTAATCAAAGAACAGAGAATTGGG
CCAAATTTGCAAATTTTATTTAAGATTAACCATTACATAACATAAGGAAAGGTAAAGAGTAAAGACTAAAATGATTTAGAAGGCCTCAACAGGGCCAAAC
ATCACAACAATCCTTCACATATATCATAAATCCAGAGAAATCCCAGTACAGCAGGGAGCTTAGAAACCACCACGGAGACGCAAGACAAGGTGGAGGGTGG
ACTCCTTCTGAATGTTGTAATCAGCTAGGGTCCTTCCATCTTCCAATTGCTTCCCAGCAAAAATCAATCTTTGCTGATCTGGAGGAATCCCTTCCTTGTC
TTGAATTTTGGCCTTAACGTTATCAATTGTATCTGAGCTTTCCACCTCCAAAGTGATGGTCTTTCCTGTCAAAGTCTTGACAAAGATCTGCATCCCACCA
CGAAGCCTCAAGACCAGATGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGCCAAAGTTCGGCCGTCCTCGAGCTGCTTCCCGGCGAAGATAAGCCTTT
GCTGGTCTGGGGGGATCCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGACTTCGAGGGTGATGGTTTTTCCGGTCAG
GGTTTTGACAAAGATTTGCATACCGCCACGGAGACGGAGGACAAGGTGAAGGGTTGACTCCTTCTGGATGTTGTAATCGGCCAAGGTTCGGCCGTCCTCG
AGTTGTTTTCCGGCGAAGATTAAACGCTGTTGGTCTGGGGGAATTCCCTCCTTGTCTTGGATCTTGGCCTTGACATTATCGATGGTATCGGAACTCTCGA
CCTCGAGGGTGATGGTTTTCCCGGTGAGAGTCTTAACGAAGATCTGCATACCGCCACGGAGACGGAGGACAAGGTGGAGGGTCGACTCCTTTTGGATGTT
GTAATCGGCCAAGGTTCGGCCGTCCTCGAGTTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGAGGAATCCCCTCCTTGTCTTGAATCTTAGCCTTA
ACATTATCGATGGTATCGGAACTCTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATCTTGTTTGGTTGGCTGAGGAGAA
AAAATCGATGAGAAAAAAAGCACAGAGAAGAAGGAGAATTATAGTAATCGTAATTGGGATGAGAAATTAAG