« Back to Lupinus angustifolius search


Detailed information on CNT30727046


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7J1C5|PSBF_ACOCL, E-value = 4e-20

BLAST vs NONCODE:
NONMEST001986, E-value = 3e-61

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30234601Lupinus angustifoliusBrassica oleracea29.4650.5390.76238forward
CNT30555951Lupinus angustifoliusOryza glaberrima63.9962.9788.78517forward
CNT30355329Lupinus angustifoliusLactuca sativa33.2937.8994.42269forward
CNT30149874Lupinus angustifoliusBrachypodium distachyon63.9940.1187.43517forward
CNT30117202Lupinus angustifoliusOryza nivara21.789.4589.77176forward

Expression of CNT30727046

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MSPIRNMNHKRKYQLNRSQQYQLQYLLSKEESFQ*

Sequence

>CNT30727046
TCTTTCTTTCAATTTTAAATAAAAAGTATTGACAGATATTATTCCGTAAAAGATGTTTTGAATCAATTAATGAAGTTGATTTTTCAAAAACATCATCAAA
AACAATGAAATAAATGGAGTTTTTTTTTTAATCGCAAAAAGCAATCTAATATCTAGTGAGTCATTTGTACGAACAAAAAATATTTTAATTATTAAGAACT
CAACGGGACCCCCTCGAATTTGTCAAAGAAAGGGTGGATCCCTGTTGAGTTCTTACACTTTCATTTCGAAAACTCAATTCATCCAATTACTACAGGGATG
AGCCCAATCCGGAATATGAACCATAAAAGAAAATACCAATTAAACCGATCACAGCAATACCAGTTACAGTACCTATTATCCAAAGAGGAATCCTTCCAGT
AGTATCGGCCATTTATCCCACTTTCCTCCACATTTTATTAAGTAGTCATGCTAGAGACATAAACAGTCATAGATAATTATGAAATGATATCTTTCCGACT
GGGATAAGATAATTCTTACTATTTCCTTTTCTTCTATTAATTGAAGAAATAATTTGAAAATAAAACAGCAAGTACAAAAATTAGTAATAAACCCCAGTAG
AGACTGGTACGATTCAATTCAACATTTTGTTCGTTTGGGTTTGATTGTGTCGTAGCTCTATAATTCGGATTAGGTTTATCGTTGGATGAACTGCATTGCT
GATATTGATCCCAAAAAAGAAACGGTGGGTACCGCTAGTCCGTGAACAGCCAACCATCGTACTGTAAAAATTGGATAGGTCCTATCTATGGTCATTTGAG
CCTCCTAA