Detailed information on CNT30726897


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7Y618|YCX1_CALFG, E-value = 6e-16

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677883Lupinus angustifoliusSetaria viridis88.4627.7585.75414reverse complement
CNT30616931Lupinus angustifoliusSesamum indicum41.6714.6186.15195reverse complement
CNT3021516Lupinus angustifoliusCitrullus lanatus92.0923.4490.02431reverse complement
CNT30524944Lupinus angustifoliusPhaseolus vulgaris61.1128.7193.36286reverse complement
CNT30300194Lupinus angustifoliusTriticum aestivum88.4619.6885.51414reverse complement
CNT3018187Lupinus angustifoliusZea mays55.9872.3887.79262reverse complement
CNT30578120Lupinus angustifoliusOryza barthii62.3950.6984.93292reverse complement

Expression of CNT30726897

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MYGLEGDLSYLSRSTLQYGAKKSKEIILALISYKKRIPPFTLMSR

>peptide 2 (59 aa)
MLANNSKCLDFFRIGSSQIAMIRSTLHYFGNLRTQSYGYVKYRIFNPSRKRGKRILNFK*

>peptide 3 (31 aa)
MKVICTAWREIFHIFRDPPYNMGPKSQKKLF*

Sequence

>CNT30726897
GATTCGAAACTATGATATGTCCAAGGTCCAATAATGAAATAATTTCAGAAGTTTTCCTTGACTTTGTCCATGTTAGCAAACAATTCTAAATGCCTCGACT
TTTTTAGAATAGGTTCGAGTCAAATAGCAATGATTCGAAGCACTTTACACTATTTTGGAAACCTAAGGACTCAATCGTATGGATATGTAAAATACAGGAT
TTTCAATCCTAGTAGGAAAAGGGGGAAACGAATACTCAATTTCAAGTGAGTAAACAAAATTCCATATTCGATCTCATAGATACATAGATACATATAAAAT
TCTGTGGAAAGTTGTATTTGATGAAAGTCATATGTACGGCTTGGAGGGAGATCTTTCATATCTTTCGAGATCCACCCTACAATATGGGGCCAAAAAGTCA
AAAGAAATTATTTTAGCCCTTATAAGTTATAAAAAAAGGATTCCCCCTTTCACGCTCATGTCACGGCG