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Detailed information on CNT30726869


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30712220Lupinus angustifoliusGlycine max15.4955.4186.19210forward

Expression of CNT30726869

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MVYLTNKTSHYFQLKSDCKSCKSEVMALDQFKKGQVYYALF*

>peptide 2 (57 aa)
MVQWMVERGRAREALGSDQRPSEARLDLAHHWRSCSHGLNLLIPQVTRQRVTTNSGVT

>peptide 3 (58 aa)
IRFYVRFFKKRGIQLKKKDSKSEVKNIGPKIGENRIPTMSIINHEVLIHVTLSLTQNI*

>peptide 4 (30 aa)
MKIIHCHNIIRTLITSHIGNVNPRASIRSS*

Sequence

>CNT30726869
TATAAGATTTTATGTTCGATTTTTTAAGAAAAGAGGGATTCAATTGAAAAAGAAAGATTCAAAATCGGAAGTAAAAAACATTGGACCAAAAATAGGGGAA
AATAGAATTCCAACTATGTCCATTATAAACCATGAGGTCCTAATTCATGTAACCCTATCTCTAACACAAAATATATGAAAATCATTCATTGTCACAATAT
AATTAGAACACTTATTACGTCTCATATTGGTAATGTCAATCCACGGGCAAGCATCAGAAGTTCATGAGCATTATTTGATTAGTATCAATGAATGGTGTAT
TTGACTAACAAAACATCACATTATTTTCAACTCAAATCAGATTGTAAAAGCTGTAAAAGTGAAGTCATGGCTCTAGACCAATTTAAAAAAGGACAAGTTT
ATTATGCCTTATTCTAATTGGGTTACTAACCCCACAACTTTTTTTGGAAATTATATTAAACCCTGTAACATCTTATTCTTGTAACTCATTTATTTGTAAT
AATATTCCTTTTTGTTGATCTAAAGAAACATTTATTACACTTGGTGAAGATATTATCACAAACCCTAACGCAGCACCCACTCCAAGGTTTTGAAAAATGA
AAAGGAAGACTTTCCTCTACTCACGAATCTAAATTATCACAATAGATGCATGTCATAGTAACATCAGAGTGGACTAAACTTATCATACCAAAATTATCTA
ATACCAAAATTATTAGATAATTCTATCATCACAACCGCAACACAGCTTTGCTACTGAAACTGTGGTTGAACCGTGTTGAAATAAGGCTGATTTTTACTTT
GATATAAGGCACACTTGCATGCATTTAATAGTATCACCACCCTTCATGCTACTGGTTAATTTGTAATTCTATTAAAAGATATAACGGGGAAATGAGAGAG
AATTTTTAACATCGTGACGGATTGAGTCATAAAATACAGCATATACATCCATCCACATCAGAAGCATTCAATACTTGTTCATTCATATGAGGATGAATAA
TAGAAACAAAGAAAGTTAAGTTATTCACTTGAAGTAGTATGGAAGGTCTAAGACATAAAGGAGAAAGTAAGCCCAGGTAACACCAGAAATCCCTCCAAAG
AAGAACCCACCAGTGAACTTGGCCCAACCATCTGCTGTTTGGAGCTGATCCGGCTCCTTCTTTCGGCCGGTCAAGGTAAGGGATGGTGCAGTGGATGGTG
GAGAGGGGACGAGCCAGAGAGGCCCTTGGGAGTGACCAGCGGCCTAGTGAAGCTAGACTTGACCTGGCTCACCATTGGAGAAGCTGTAGCCATGGCTTAA
ATCTGTTGATTCCACAAGTCACGAGACAACGAGTTACTACAAACAGTGGCGTGACT