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Detailed information on CNT30726403


BLAST search results

BLAST vs Swiss-Prot:
sp|O49169|EF1A_MANES, E-value = 1e-81

BLAST vs NONCODE:
NONMEST004097, E-value = 2e-153

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30546688Lupinus angustifoliusIpomoea triloba89.9499.7789.51429forward
CNT30698284Lupinus angustifoliusQuercus lobata28.7247.991.24137forward
CNT30160107Lupinus angustifoliusPistacia vera91.497.5489.91436forward
CNT3093993Lupinus angustifoliusSolanum tuberosum96.8688.5187.01462forward
CNT30590647Lupinus angustifoliusMusa acuminata26.2140.0690.4125forward
CNT30450104Lupinus angustifoliusSaccharum spontaneum19.522.386.0293forward
CNT30338600Lupinus angustifoliusEragrostis tef93.7193.1286.8447forward
CNT30120974Lupinus angustifoliusCitrus clementina96.8676.2488.31462forward

Expression of CNT30726403

Peptides detected in this lncRNA

>peptide 1 (47 aa)
LVTTTDHLLDSKSESKQSMLTGLSILGNTSFKTTSGGINNKDSTVSL*

>peptide 2 (66 aa)
MSGCINDCAVYLVVSNFHKAISIVIPLSRSALSLSSTQAYLNDLLFISAASFSNLSITRLSIPPSL*

>peptide 3 (82 aa)
LLQQQIICLTPRVKASRACSRVCPSLEIPASKPPVVESIIRTAQSACDVPVIMFLMKSRCPGASMTVQYTWWSQTSTKQYQL*

>peptide 4 (41 aa)
MTSCSSQQPLSQTSQSHACQYLQACRSSGQWWLISQNRHVQ*

Sequence

>CNT30726403
CTTGTTACAACAACAGATCATTTGCTTGACTCCAAGAGTGAAAGCAAGCAGAGCATGCTCACGGGTCTGTCCATCCTTGGAAATACCAGCTTCAAAACCA
CCAGTGGTGGAATCAATAATAAGGACAGCACAGTCAGCCTGTGATGTTCCAGTAATCATGTTTTTGATGAAATCACGATGTCCGGGTGCATCAATGACTG
TGCAGTATACTTGGTGGTCTCAAACTTCCACAAAGCAATATCAATTGTAATTCCTCTTTCACGCTCAGCCTTGAGCTTGTCAAGCACCCAGGCATACTTG
AATGACCTCTTGTTCATCTCAGCAGCCTCTTTCTCAAACCTCTCAATCACACGCTTGTCAATACCTCCAAGCTTGTAGATCAAGTGGCCAGTGGTGGTTG
ATTTCCCAGAATCGACATGTCCAATGACGACAATGTTAATGTGAACCTTCTCTTTTCCCATGATGTCTTAAGCTGAA