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Detailed information on CNT30726402


BLAST search results

BLAST vs Swiss-Prot:
sp|O49169|EF1A_MANES, E-value = 4e-94

BLAST vs NONCODE:
NONMEST004097, E-value = 2e-153

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30709121Lupinus angustifoliusGlycine max84.28100.2585.07402forward
CNT30288144Lupinus angustifoliusTriticum aestivum72.3393.2488.12345forward
CNT30386294Lupinus angustifoliusTriticum turgidum70.6591.5888.13337forward
CNT30233912Lupinus angustifoliusBrassica oleracea44.4494.6487.74212forward
CNT30658093Lupinus angustifoliusTriticum dicoccoides74.6381.4687.92356forward
CNT30608684Lupinus angustifoliusGossypium raimondii85.5396.9188.73408forward
CNT3067093Lupinus angustifoliusLeersia perrieri51.3654.8188.98245forward
CNT30646927Lupinus angustifoliusRosa chinensis60.886.3190.34290forward
CNT30480842Lupinus angustifoliusArabidopsis halleri57.8656.6787.32276forward
CNT30363108Lupinus angustifoliusSorghum bicolor70.444285.71336forward

Expression of CNT30726402

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MTSCSSQQPLSQTSQSHACQYLQACRSSGQWWLISQNRHVQ*

>peptide 2 (42 aa)
MSGCINDCAVVLGGLKLPQSNINCNSSFTLSLELVKHPGILE*

>peptide 3 (68 aa)
LVTTTDHLLDSKSESNRACSRVCPSLEIPASKPPVVESIIRTAQSACDVPVIMFLMKSRCPGASMTVQ*

>peptide 4 (38 aa)
LLQQQIICLTPRVKATEHAHGSVHPWKYQLQNHQWWNQ*

>peptide 5 (29 aa)
MLTGLSILGNTSFKTTSGGINNKDSTVSL*

Sequence

>CNT30726402
CTTGTTACAACAACAGATCATTTGCTTGACTCCAAGAGTGAAAGCAACAGAGCATGCTCACGGGTCTGTCCATCCTTGGAAATACCAGCTTCAAAACCAC
CAGTGGTGGAATCAATAATAAGGACAGCACAGTCAGCCTGTGATGTTCCAGTAATCATGTTTTTGATGAAATCACGATGTCCGGGTGCATCAATGACTGT
GCAGTAGTACTTGGTGGTCTCAAACTTCCACAAAGCAATATCAATTGTAATTCCTCTTTCACGCTCAGCCTTGAGCTTGTCAAGCACCCAGGCATACTTG
AATGACCTCTTGTTCATCTCAGCAGCCTCTTTCTCAAACCTCTCAATCACACGCTTGTCAATACCTCCAAGCTTGTAGATCAAGTGGCCAGTGGTGGTTG
ATTTCCCAGAATCGACATGTCCAATGACGACAATGTTAATGTGAACCTTCTCTTTTCCCATGATGTCTTAAGCTGAA