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Detailed information on CNT30726375


BLAST search results

BLAST vs Swiss-Prot:
sp|Q96460|TBA2_HORVU, E-value = 1e-50

BLAST vs NONCODE:
NONGMAT000220, E-value = 2e-107

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30501067Lupinus angustifoliusCoffea canephora93.2247.5884.3344forward
CNT30606894Lupinus angustifoliusGossypium raimondii97.2998.3686.91359forward

Expression of CNT30726375

Peptides detected in this lncRNA

>peptide 1 (29 aa)
LRNKTIEVGVCRTLNVKRAPANVINSFII*

Sequence

>CNT30726375
CTGAGAAACAAGACGATTGAGGTTGGTGTATGTAGGACGCTCAATGTCAAGAGAGCGCCTGCAAATGTCATAAATAGCTTCATTATCTAAAAGAATGGAC
ACATCAGTGTGCTCTAGGAGGGAGTGGGTGGAGAGGACACTGTTGTATGGCTCAACAACAGAGGTTGAGACCTGAGGAGAAGGGTAAACAGTGAACCCAA
GCTTTGATTTCTTTCCATAATCAACAGACAAACGCTCCAACAGAAGGGAACCGAGACCAGAACCAGTTCCTCCACCAACAGCATTGAAAACCAAGAAACC
TTGGAGACCATGCAGTTATCAGCAAGCTTCCTAATGCGGTCCAAGCACAGATCAACGATCTCTTTCCCA