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Detailed information on CNT30726318


BLAST search results

BLAST vs Swiss-Prot:
sp|P17786|EF1A_SOLLC, E-value = 3e-79

BLAST vs NONCODE:
NONGMAT000814, E-value = 3e-137

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30146188Lupinus angustifoliusMedicago truncatula73.843.0692.6338forward

Expression of CNT30726318

Peptides detected in this lncRNA

>peptide 1 (66 aa)
EILDCNILNIESNIVSWKSFLESLVVHLHRLNFIVSPVGPKVTSIPGFTTPVSTRPTGTVPIPPIL*

>peptide 2 (74 aa)
LRSLTATFLTLNPTLSPGRASWRASWCISTDLTSLSVQWDQKSQAYQASQHQSQHVPLAQFQYHQSCRHPAMEA*

Sequence

>CNT30726318
TTGAGATCCTTGACTGCAACATTCTTAACATTGAATCCAACATTGTCTCCTGGAAGAGCTTCTTGGAGAGCCTCGTGGTGCATCTCCACAGACTTAACTT
CATTGTCAGTCCAGTGGGACCAAAAGTCACAAGCATACCAGGCTTCACAACACCAGTCTCAACACGTCCCACTGGCACAGTTCCAATACCACCAATCTTG
TAGACATCCTGCAATGGAAGCCTGAGAGGCTTGTCTGTGGGTCTCTTGGGCTCATTGATCTGGTCAAGAGCCTCAAGTAGAGTTGGTCCCTTGTACCAGT
CAAGGTTGGTGGACCTCTCAATCATGTTGTCTCCCTCGAAACCAGAGATGGGCACAAAAGGAATTTTGTCTGGGTTGTAACCAACCTTCTTCAGGTAAGA
AGAAACTTCCTTCACGATTTCATCATACCTAGCCTTAGAGTACTTGGGTGTAGTGGCA