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Detailed information on CNT30726138


BLAST search results

BLAST vs Swiss-Prot:
sp|P42067|TIP1_MEDSA, E-value = 2e-53

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30382149Lupinus angustifoliusManihot esculenta15.0425.9686.4974forward
CNT30420453Lupinus angustifoliusPapaver somniferum21.7511.9887.85107forward
CNT3050751Lupinus angustifoliusCucumis sativus54.6727.3478.44269forward

Expression of CNT30726138

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MLEPEPAKTKMKVEINSASPAFNVSGCVASSGLPIAMFLIGIF

>peptide 2 (31 aa)
KRKLPKLIEIKTQKKLKEIDIFILIQRRMLE*

Sequence

>CNT30726138
AAAGAGAAAATTGCCAAAGTTAATTGAAATTAAGACACAAAAAAAATTAAAAGAGATAGACATTTTCATTTTAATTCAAAGGAGAATGCTAGAATGATAC
AACCAACATTCAATGGTGAAGATGATAATGTACAAATAATTAAAGCAAAATAGAACAACATAATCATCATCAACCATTCAAATAAAGATCAAGGCCCACC
AATTTTTCATCACAAACACAAGGTAACAGCAGGGTTAACATGACCACCAGAAATATTAGCACCAACAGAAACAGCAACAAAAAGAGCAAAAGCGTGAGCA
ATTGAAGCAGAAATTAGTCCAGCAGGTGTAGCTGGACCATCATTAGTAAGCTTATTATAAGCAATGCTTGAACCTGAACCAGCAAAGACAAAAATGAAAG
TTGAGATAAACTCAGCAAGTCCTGCTTTTAATGTGTCTGGGTGTGTTGCTTCTTCTGGTCTTCCAATTGCTATGTTTCTGATCGGCATTTTT