« Back to Lupinus angustifolius search


Detailed information on CNT30725998


BLAST search results

BLAST vs Swiss-Prot:
sp|Q42064|RL83_ARATH, E-value = 1e-32

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672571Lupinus angustifoliusSetaria viridis77.1438.5786.42162forward
CNT30393881Lupinus angustifoliusTriticum turgidum36.1918.8686.8476forward
CNT30592159Lupinus angustifoliusMusa acuminata60.9539.5185.94128forward
CNT30555589Lupinus angustifoliusOryza glaberrima77.149.2885.19162forward
CNT30440426Lupinus angustifoliusAegilops tauschii59.5226.6582.4125forward
CNT30624277Lupinus angustifoliusDaucus carota10044.1286.67210forward
CNT30721746Lupinus angustifoliusTriticum spelta100.4813.1282.94211forward
CNT30367313Lupinus angustifoliusSorghum bicolor77.1428.5285.19162forward
CNT30646445Lupinus angustifoliusCannabis sativa95.7158.2684.08201forward
CNT3024196Lupinus angustifoliusPopulus trichocarpa44.7620.791.4994forward
CNT30151099Lupinus angustifoliusBrachypodium distachyon77.1442.1987.04162forward

Expression of CNT30725998

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MASQFSLHLQLDQSWPCKHLEQFSLNQMEA*

>peptide 2 (49 aa)
LVVTSSMRMLNWIHSHTTNLRPAVSLDPKLVVSITSLKNGFSVLPPPAT*

Sequence

>CNT30725998
CTGGTGGTTACCTCCTCCATGAGGATGCTCAACTGGATTCATAGCCACACCACGAACCTTAGGCCAGCAGTTTCTCTTGACCCTAAACTTGTGGTAAGCA
TTACCAGCCTTAAGAATGGCTTCTCAGTTCTCCCTCCACCTGCAACTTGACCAATCATGGCCCTGCAAGCACTTGGAACAATTTTCTTTGAACCAGATGG
AAGCTTGATC