Detailed information on CNT3072574


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30531005Quercus suberEucalyptus grandis59.4332.7797.421163forward
CNT30730478Quercus suberCorchorus capsularis59.9493.6297.441173reverse complement
CNT30489795Quercus suberOlea europaea57.2893.1197.771121reverse complement
CNT30628180Quercus suberDaucus carota58.8789.5196.611152reverse complement
CNT3037201Quercus suberCucumis melo59.0777.6998.181156forward

Expression of CNT3072574

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MPTRDRRMLLIGLRRHLMRNQSLWVPGGVWSQG*

>peptide 2 (36 aa)
MITRRIARPSCRRRIIQISALSTFDGRIVAYYGGDG*

>peptide 3 (47 aa)
MGGGAWPFLVGGVICLVNSVNERDLSLLTSYAEVTLRGQLLRGTMAA*

>peptide 4 (52 aa)
MINRDSRGHSYFIVRGEILGFMKDEQLRKHLPRMFSLIKNESWGLEDDQIPS*

>peptide 5 (39 aa)
MKNVAKCDTWCELQNPANHRVFERKLRPKPFGRGHVCLGV

>peptide 6 (44 aa)
MHLLDKRPTRALLAALLIHDNSTDRTAIVPATHHSNFCPINFRW*

>peptide 7 (30 aa)
PASSHMLVSKIKPCMCKYELIQTVKLRMAH*

Sequence

>CNT3072574
ATCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACTAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAG
TTATAGTTTGTTTGATGGTACCTGCTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTA
GATAAAAGGCCGACGCGGGCTCTGCTCGCTGCTCTGCTGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCT
GCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACTATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCT
ACCACATCCAAGGAAGGCAGCAGAGCGGTCCGCCCCTGGTGTGCACCGGTCTGCTCGTCCCTTCTACCGGCGATGCGCTCCTGGCCTTAACTGGCCGGGT
CGTGCCTCCGGTGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCATGGGATAACATCATAGGATTTCGGTCCT
ATTCTGTTGGCCTTCGGGATCGGAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACG
AACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAAC
GATGCCGACCAGGGATCGGCGGATGTTACTTATAGGACTCCGCCGGCACCTTATGAGAAATCAAAGTCTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGC
TGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATTTGACTCAACACGGGGAAACTTACCAGGTCCAGACATAGTAAG
GATTGACAGACTGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGTGATTTGTCTGGTTAATTCCGTTAACGAACG
AGACCTCAGCCTGCTAACTAGCTATGCGGAGGTGACCCTCCGCGGCCAGCTTCTTAGAGGGACTATGGCCGCTTAGGCCAAGGAAGTTTGAGGCAATAAC
AGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGTTTATAGCCTTGGCCGACAGGCCCGGGTAATCTTTGAA
ATTTCATCATGATGGGGATAGATCATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTACGTCCCTGCCC
TTTGTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAGTGTTCGGATCGCGGCGACGTGGGCGGTTCGCTGCCGGCGACGTCGCGAGAAG
TCCACTGAACCTTATCATTTAGAGGAAGGAGAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGAAACCTGCACAGCAGAACGA
CCCGCGAATTGGTGACAACCGACGGGGGGCGGGGGGCGCTCGTCGCCCCCTCGCCCCCCACGCAGGCGGGGACCTCGCGTCTCTTGCCTGCAAACCGAAC
CCCGGCGCGGAACGCGCCAAGGAAATCGAACCAAGAGAGCCGCGCCGGAGGCCCCGGACACGGTGCGCCCCCGGCGTCGGCGTCTTACGAATTATTTAAA
ACGACTCTCGGCAACGGATATCTAGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGCGAATCATCGAGTT
TTTGAACGCAAGTTGCGCCCGAAGCCTTTCGGCCGAGGGCACGTCTGCCTGGGTGTC