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Detailed information on CNT30725701


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694844Lupinus angustifoliusOryza sativa4.6721.0493.5177forward
CNT30191267Lupinus angustifoliusSecale cereale4.7923.2493.6779forward
CNT30224947Lupinus angustifoliusHordeum vulgare4.7326.5393.5978forward
CNT30395161Lupinus angustifoliusTriticum turgidum4.7321.9193.5978forward
CNT30309894Lupinus angustifoliusCamelina sativa4.7337.3294.8778forward
CNT3059857Lupinus angustifoliusArabidopsis lyrata420.2595.4566forward
CNT30135839Lupinus angustifoliusLolium perenne4.7332.9192.3178forward
CNT30652446Lupinus angustifoliusRosa chinensis4.6724.9292.2177forward
CNT30721855Lupinus angustifoliusTriticum spelta4.7320.5393.5978forward
CNT30175528Lupinus angustifoliusVigna angularis4.6724.6896.177forward

Expression of CNT30725701

Peptides detected in this lncRNA

>peptide 1 (57 aa)
MSHASCMYSFEIYFFFCSNQMFSWKRFYLIKEHLQYSMTNSVNKDFLHRQYLNLSLE*

>peptide 2 (38 aa)
TCRLGMFFLRSASIAFNVKIKCMLCELCSRIRGPKSKG*

Sequence

>CNT30725701
GAACTTGCCGACTTGGTATGTTCTTTCTTCGATCAGCATCAATTGCATTCAATGTGAAAATCAAGTGTATGCTGTGTGAATTGTGTTCGAGGATAAGGGG
GCCAAAATCCAAAGGATAAGTAGTTTCTTTCTTTCTTTTCTCCCTTTTTCCCTTTTAATAAAACAATGATAGGTATTTTTCTCTCTCTTAAATCCAATTA
CATATCGTAGGAGAGTTTTACGATCTATAGTGATACTGGTTCAAACATGATTGTCTCTATGGTTTAAACTTTAAACAAAAACTACGTCCTAAGCCTAGCA
TAGAGGCAACCATATTCTATTCATGTGGAAAAATTATGAACAACAAATTTCTTACCAATCTATTAGCCTGTTTAAATGTATATATAATGACTCATTTTAA
GATTATATAGTATAATAAATCTTTAAATAGATTAACGAGTTATGCACGTATTCCTATATGTTATATAGGCCCACTCTTAACTGAAACAAATAAATATTTT
ATAAATTTTAATATTCCGAAGATAAATCATGATAATAAAATTTTAGATAAAACAAAATAATTAATCAATTTTTTTATTATCAACATAGTAGTCAAAATCC
CATCGAAATGAATGATTGATTAATCTATCTAAATTCAATTTATGTCTCATGCATCATGTATGTATAGTTTTGAAATCTATTTTTTTTTTTGCTCTAATCA
AATGTTTTCTTGGAAGCGATTTTATTTGATTAAAGAACATCTACAATATAGTATGACTAATTCTGTCAATAAAGATTTTCTTCATAGGCAATACTTGAAT
TTGAGTCTTGAATAAAGGAAAATATATATATATATATATATCATATTGAAAATATATTATTCAAATACTCACAAATAAATAGGATAAATTTATTTCAAAT
TAAAATCAATGATCATGTATTATGTTAAATGTTAATTATTGTGACAGTTACATATCTAAGAAAGATTAATTCATTACCAATAAGGTGAAAGATACTCTTA
ATTATATTTAAAAAATCTCAAAATGTAAAAAAACAAAAAAAATTGTAGACAATAAAAAAAACCACCACAACCAAATATTGGGCTAAGAAGAAAAACCCAA
CGGGCCAGGCCCACTAATTCAAAATTGAAGCCCGAAGCATGTTAGGGTTACTTCCCTGTTCGCTATATAAAACGCTGAAACCCTTCTTTTGATTGTTACT
ACAACAACTAGGGTTCGTTCTGAGATTCAGTTTCGTGCTAGAGAATCATGAGGGCCAAGTGGAAGAAGAAGCGTATGAGGAGGCTTAAGAGGAAGCGCCG
AAAGATGAGACAGAGATCCAAGTAGTTTTTGTGTGTTTTCCTTACCAACAATAACAATCTATCCTAGTTTTGTTTTTTCGTATTGCGTTGTTTTTTTATG
TTTGATGTTATGATACATTTTATTTGTATCTTTTGGAACTTGCCTAAAGTTATAAATGTTGTTTCTGCTCCAGATTAAATTTCGTTAATATCTGAGTATT
TTTTAATTTTGTTTATTATAATTTATTATTTTTTGAGGTTATGTATCAAACCTACTGCATGCTTAATTACTTTTAGGTCACATGATCCTGAATTCTAATG
TTCTAGAATTGTATAACTATAAATGAGGTAGTAATCTAGTGTTGATATG