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Detailed information on CNT30725462


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LHJ8|SAP5_ARATH, E-value = 1e-43

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30572839Lupinus angustifoliusVitis vinifera20.768.879.65172forward

Expression of CNT30725462

Peptides detected in this lncRNA

>peptide 1 (46 aa)
FTITYKFPIQIKTKNIIWKLKKNKAQHPHALNCFLFCIPKKENTNN*

>peptide 2 (48 aa)
MVKRQSTPPFHAIFVKLTFFVSQIQIFTIFAALTTGFSLAMASLPTVL*

>peptide 3 (64 aa)
MAIGVPMLGAKKVTAPAPKSGKSDSLPATGAPIHNTLSLKRRRYTPLIRFHIAFNGRMRSLRRP*

Sequence

>CNT30725462
TTCACAATAACTTATAAATTTCCAATCCAAATAAAAACTAAAAACATAATTTGGAAATTAAAAAAAAACAAAGCTCAGCATCCACACGCACTGAATTGTT
TCCTTTTCTGTATCCCTAAGAAAGAGAACACGAATAATTAAACATCGATCATGGTGAAACGACAATCAACGCCACCGTTCCATGCAATCTTCGTTAAACT
CACGTTCTTCGTTTCGCAAATTCAGATTTTCACGATCTTCGCAGCTTTAACCACCGGATTCTCCCTCGCGATGGCTTCCCTTCCAACGGTTTTATAATCA
TAGCTACAATCATGGCGATCGGAGTACCTATGCTCGGAGCAAAAAAGGTCACCGCACCGGCACCGAAATCCGGTAAGTCCGACTCTCTTCCGGCAACCGG
AGCACCGATTCACAACACGCTTAGCCTCAAACGACGCCGTTACACTCCGTTGATCCGTTTTCACATCGCTTTCAACGGAAGGATGAGATCTCTTCGGAGA
CCGTGATGACGTGGCAGATCCGGTCGTAGCTGAAGCTTTTTCATCGGAGAATCTAGAAGGTGCTGAGATCGAAGCGGTGGTAGCGTTAAAGCATTTCTGA
CACATGCTGTTATTGGTGGAAGAGTTAACGGTAATAGTTTCTGGAACCTTCTTAAACTCTGTCTCTTCTTTCTCCATCTTTTGAGCCATTTATTTGAAGA
TAATAAAGAAGCTTTGGTTTTTTGTTATGATTGAAAGAGAGAAAAAGAAGAGAATTTTTTTTGAAGGGTGGTTATGAAAATGAAGGAGGAATGGGTGGAT
ATGTAATAAGAGAGGGTGGGTTTGTGAGGTT