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Detailed information on CNT30725370


BLAST search results

BLAST vs Swiss-Prot:
sp|P09756|CB23_SOYBN, E-value = 8e-141

BLAST vs NONCODE:
NONMTRT001605, E-value = 2e-84

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30538977Lupinus angustifoliusBrassica napus55.270.6280.65584forward
CNT30173250Lupinus angustifoliusTrifolium pratense54.5450.0483.36577forward
CNT3078262Lupinus angustifoliusBrassica juncea43.8667.4482.33464forward
CNT30202642Lupinus angustifoliusHelianthus annuus31.4759.7884.38333forward
CNT30714756Lupinus angustifoliusMalus domestica golden50.855384.76538forward
CNT30176340Lupinus angustifoliusVigna angularis34.439.2284.62364forward

Expression of CNT30725370

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MANLPFFSSFTFNSAKASGSSARPNGSKLPPG*

>peptide 2 (35 aa)
MGRASPPGRPRMGKKGPWLRLPFLNDGDELVFMFM*

>peptide 3 (36 aa)
MEILPTPSSGADGESFTAWPAKDGEERAMVEAAIFE*

>peptide 4 (51 aa)
MDQAWVSQVVKPALTEDLGSSLEPHSLTEFNTVTSQELWEDNSQSSKHSPP*

>peptide 5 (59 aa)
MFYFFRCSVSGDKVGGKCPSIVVDWVCNMVGKVLQWTLTSDNSLNKETEHGEHGQPSIL*

Sequence

>CNT30725370
TTTAATATATACAACTTAAGTGGTTGCATGCATATAAATTAGAATTCAAATATCAAATTGAAGAGAGAACAACGGCCAACCAGATTAGAAATTAAGTTGC
ATTAATTTAGATCAAATAGATAAACACAATAATTCACATTAACTGAAGAAGTACAATTTTAATGTTTTATTTTTTTCGGTGCTCAGTTTCCGGGGACAAA
GTTGGTGGCAAATGCCCAAGCATTGTTGTTGACTGGGTCTGCAATATGGTCGGCAAGGTTCTCCAATGGACCCTTACCAGTGACAATAGCCTGAACAAAG
AAACCGAACACGGAGAACATGGCCAACCTTCCATTCTTTAGCTCCTTCACCTTCAACTCAGCAAAGGCCTCTGGGTCATCAGCAAGGCCCAATGGGTCAA
AGCTGCCACCGGGGTAGAGTGGGTCAGTGACCTCTCCAAGAGGACCACCTGCAATTCTGTAACCCTCAACTGCACCCATCAAGATAACTTGTGTAGCCCA
TATGGCAAGGATACTCTGAGCATGGATCAAGCTTGGGTTTCCCAAGTAGTCAAGCCCGCCCTCACTGAAGATCTGGGATCCAGCCTTGAACCACACAGCC
TCACCGAATTTAACACCGTTACGAGCCAAGAGCTCTGGGAAGACAATTCCCAAAGCTCCAAGCATAGCCCACCGTGAGTGGATCACCTCCAACTCACGGT
TCTTGGCAAAGGTCTCTGGGTCAGCTGAAAGCCCAGCAGTGTCCCAACCATAGTCACCAGGGAACTCACCATCAAGTAGCTTGGGGCCTCACCAGAGAAT
GGGCCCAAGTACTTAACACGGTCTGGGCCGTACCATGGGCTTCCAGAGGAAACTTTCTTGGTGACAGTTTTCCTCATGGAGATCCTTCCAACTCCGAGCT
CTGGAGCTGATGGGGAGAGCTTCACCGCCTGGCCGGCCAAGGATGGGGAAGAAAGGGCCATGGTTGAGGCTGCCATTTTTGAATGATGGTGATGAGCTTG
TGTTTATGTTTATGTAGGGAGTAGTGATTGGAAAAGATGAGAGATTTGAGGAAACATG