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Detailed information on CNT30725332


BLAST search results

BLAST vs Swiss-Prot:
sp|P09756|CB23_SOYBN, E-value = 0.0

BLAST vs NONCODE:
NONMTRT001605, E-value = 2e-84

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30500907Lupinus angustifoliusCoffea canephora64.1770.6284.57661forward
CNT30616124Lupinus angustifoliusSesamum indicum63.6957.4984.3656forward
CNT30525395Lupinus angustifoliusPhaseolus vulgaris68.4569.1985.82705forward
CNT3046618Lupinus angustifoliusPrunus dulcis63.5978.3583.82655forward
CNT30621493Lupinus angustifoliusCajanus cajan67.2851.6486.72693forward
CNT30153357Lupinus angustifoliusPrunus persica64.1737.4384.11661forward
CNT30705057Lupinus angustifoliusPrunus avium54.3767.7185560forward
CNT3055180Lupinus angustifoliusAmborella trichopoda58.4558.2880.56602forward
CNT30119285Lupinus angustifoliusCitrus clementina64.2774.0584.59662forward

Expression of CNT30725332

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MANLPFFSSFTFNSAKASGSSARPNGSKLPPG*

>peptide 2 (59 aa)
MFYFFRCSVSGDKVGGKCPSIVVDWVCNMVGKVLQWTLTSDNSLNKETEHGEHGQPSIL*

>peptide 3 (51 aa)
MDQAWVSQVVKPALTEDLGSSLEPHSLTEFNTVTSQELWEDNSQSSKHSPP*

>peptide 4 (36 aa)
MEILPTPSSGADGESFTAWPAKDGEERAMVEAAIFE*

>peptide 5 (35 aa)
MGRASPPGRPRMGKKGPWLRLPFLNDGDELVFMFM*

Sequence

>CNT30725332
TGCATATAAATTAGAATTCAAATATCAAATTGAAGAGAGAACAACGGCCAACCAGATTAGAAATTAAGTTGCATTAATTTAGATCAAATAGATAAACACA
ATAATTCACATTAACTGAAGAAGTACAATTTTAATGTTTTATTTTTTTCGGTGCTCAGTTTCCGGGGACAAAGTTGGTGGCAAATGCCCAAGCATTGTTG
TTGACTGGGTCTGCAATATGGTCGGCAAGGTTCTCCAATGGACCCTTACCAGTGACAATAGCCTGAACAAAGAAACCGAACACGGAGAACATGGCCAACC
TTCCATTCTTTAGCTCCTTCACCTTCAACTCAGCAAAGGCCTCTGGGTCATCAGCAAGGCCCAATGGGTCAAAGCTGCCACCGGGGTAGAGTGGGTCAGT
GACCTCTCCAAGAGGACCACCTGCAATTCTGTAACCCTCAACTGCACCCATCAAGATAACTTGTGTAGCCCATATGGCAAGGATACTCTGAGCATGGATC
AAGCTTGGGTTTCCCAAGTAGTCAAGCCCGCCCTCACTGAAGATCTGGGATCCAGCCTTGAACCACACAGCCTCACCGAATTTAACACCGTTACGAGCCA
AGAGCTCTGGGAAGACAATTCCCAAAGCTCCAAGCATAGCCCACCGTGAGTGGATCACCTCCAACTCACGGTTCTTGGCAAAGGTCTCTGGGTCAGCTGA
AAGCCCAGCAGTGTCCCAACCATAGTCACCAGGGAACTCACCAGTCAAGTAGCTTGGGGCCTCACCAGAGAATGGGCCCAAGTACTTAACACGGTCTGGG
CCGTACCATGGGCTTCCAGAGGAAACTTTCTTGGTGACAGTTTTCCTCATGGAGATCCTTCCAACTCCGAGCTCTGGAGCTGATGGGGAGAGCTTCACCG
CCTGGCCGGCCAAGGATGGGGAAGAAAGGGCCATGGTTGAGGCTGCCATTTTTGAATGATGGTGATGAGCTTGTGTTTATGTTTATGTAGGGATAGTGAT
TGGAAAAGATGAGAGATTTGAGGAAACATG