Detailed information on CNT30725324


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30514280Lupinus angustifoliusJuglans regia31.849.7490.6264reverse complement
CNT30200314Lupinus angustifoliusPisum sativum78.6168.485.44158reverse complement
CNT30538764Lupinus angustifoliusBrassica napus40.326.7390.1281forward
CNT30238127Lupinus angustifoliusBrassica oleracea40.326.5690.1281forward
CNT30172405Lupinus angustifoliusTrifolium pratense42.2937.4491.7685forward
CNT30647270Lupinus angustifoliusRosa chinensis26.8717.5996.354forward
CNT30623316Lupinus angustifoliusDaucus carota35.3223.3685.9271forward
CNT30153271Lupinus angustifoliusPrunus persica23.8815.8497.9248forward
CNT30408305Lupinus angustifoliusPapaver somniferum34.8324.2288.5770reverse complement
CNT3024632Lupinus angustifoliusPopulus trichocarpa45.2730.0386.8191forward
CNT30120361Lupinus angustifoliusCitrus clementina22.3914.8593.3345reverse complement
CNT30175714Lupinus angustifoliusVigna angularis41.2927.393.9883forward

Expression of CNT30725324

Peptides detected in this lncRNA

>peptide 1 (37 aa)
RWEWLSKCWPAHSKLRVEAWCLCEDTSIMSPKQEGKA*

Sequence

>CNT30725324
CTAGGTGGGAGTGGCTTAGCAAATGTTGGCCTGCCCACTCCAAGTTGAGAGTTGAGGCATGGTGCTTGTGTGAAGACACAAGTATCATGTCTCCTAAACA
GGAGGGCAAAGCGTGAGGCTGGTTTCACAGAGCAGCGATCACCTCTGGCTCTTGACAGTGGAGGGATCACAGGCTGCTGCTATACCATTCCACATGCCTG
G