Detailed information on CNT30725304


BLAST search results

BLAST vs Swiss-Prot:
sp|P09756|CB23_SOYBN, E-value = 5e-103

BLAST vs NONCODE:
NONMTRT001605, E-value = 1e-79

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30380511Lupinus angustifoliusManihot esculenta44.5665.283.44459forward

Expression of CNT30725304

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MDQAWVSQVVKPALTEDLGSSLEPHSLTEFNTVTSQELWEDNSQSSKHSPP*

>peptide 2 (35 aa)
MGRASPPGRPRMGKKGPWLRLPFLNDGDELVFMFM*

>peptide 3 (36 aa)
MEILPTPSSGADGESFTAWPAKDGEERAMVEAAIFE*

>peptide 4 (32 aa)
MANLPFFSSFTFNSAKASGSSARPNGSKLPPG*

>peptide 5 (59 aa)
MFYFFRCSVSGDKVGGKCPSIVVDWVCNMVGKVLQWTLTSDNSLNKETEHGEHGQPSIL*

Sequence

>CNT30725304
TGCATATAAATTAGAATTCAAATATCAAATTGAAGAGAGAACAACGGCCAACCAGATTAGAAATTAAGTTGCATTAATTTAGATCAAATAGATAAACACA
ATAATTCACATTAACTGAAGAAGTACAATTTTAATGTTTTATTTTTTTCGGTGCTCAGTTTCCGGGGACAAAGTTGGTGGCAAATGCCCAAGCATTGTTG
TTGACTGGGTCTGCAATATGGTCGGCAAGGTTCTCCAATGGACCCTTACCAGTGACAATAGCCTGAACAAAGAAACCGAACACGGAGAACATGGCCAACC
TTCCATTCTTTAGCTCCTTCACCTTCAACTCAGCAAAGGCCTCTGGGTCATCAGCAAGGCCCAATGGGTCAAAGCTGCCACCGGGGTAGAGTGGGTCAGT
GACCTCTCCAAGAGGACCACCTGCAATTCTGTAACCCTCAACTGCACCCATCAAGATAACTTGTGTACCCATATGGCAAGGATACTCTGAGCATGGATCA
AGCTTGGGTTTCCCAAGTAGTCAAGCCCGCCCTCACTGAAGATCTGGGATCCAGCCTTGAACCACACAGCCTCACCGAATTTAACACCGTTACGAGCCAA
GAGCTCTGGGAAGACAATTCCCAAAGCTCCAAGCATAGCCCACCGTGAGTGGATCACCTCCAACTCACGGTTCTTGGCAAAGGTCTCTGGGTCAGCTGAA
AGCCCAGCAGTGTCCCAACCATAGTCACCAGGGAACTCACCAGTCAAGTAGCTTGGGGCCTCACCAGAGAATGGGCCCAAGTACTTAACACGGTCTGGGC
CGTACCATGGGCTTCCAGAGGAAACTTTCTTGGTGACAGTTTTCCTCATGGAGATCCTTCCAACTCCGAGCTCTGGAGCTGATGGGGAGAGCTTCACCGC
CTGGCCGGCCAAGGATGGGGAAGAAAGGGCCATGGTTGAGGCTGCCATTTTTGAATGATGGTGATGAGCTTGTGTTTATGTTTATGTAGGGAGTAGTGAT
TGGAAAAGATGAGAGATTTGAGGAAACATG