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Detailed information on CNT30724960


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30619421Lupinus angustifoliusSesamum indicum94.6270.6894.32933reverse complement
CNT3089434Lupinus angustifoliusVigna radiata95.0358.4595.41937reverse complement
CNT30628227Lupinus angustifoliusDaucus carota89.6698.6695.14884forward

Expression of CNT30724960

Peptides detected in this lncRNA

>peptide 1 (67 aa)
MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWPLPRRPGIGRAL*

>peptide 2 (63 aa)
SPDSPTLPSAATSRFRNFNPIPFRSARLERCQTGFPRPLGSTNPCASAVHMEPFPSSAFKVLI*

>peptide 3 (41 aa)
MLSLEPFTEDQGRSACNPQGDPTNQLPCALRVYLPADSHTCQ

>peptide 4 (37 aa)
MAHLELSIPWRGSTKQPRRPTYLKFENRSRALRPRCL*

Sequence

>CNT30724960
GTCTCCGGACTCCCCAACGTTGCCGTCAGCCGCCACGTCCCGGTTCAGGAATTTTAACCCGATTCCCTTTCGGAGTGCGCGCTTAGAGCGCTGTCAGACG
GGCTTCCCCCGTCCCTTAGGATCGACTAACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTG
CTACTACCACCAAGATCTGCACCGACGACCGCTCCGCCCGGGCTCACGCCCCAGGTTTTGCAGCGACCGCCGCGCCCTCCTACTCATCGGGGCCTGGCCC
TTGCCCCGACGGCCGGGTATAGGTCGCGCGCTTTAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAGCGGATTT
CGACTTCCATGACCACCGTCCTGCTGTCTTAATCGACCAACACCCTTTGTGGGGTCTAGGTTAGCGCGCAGTTGGGCACCGTAACCCAGCTTCCGGTTCA
TCCCGCATCGCCAGTTCTGCTTACCAAAAATGGCCCACTTGGAGCTCTCGATTCCGTGGCGTGGCTCAACAAAGCAGCCACGCCGTCCTACCTATTTAAA
GTTTGAGAATAGGTCGAGGGCGTTGCGCCCCCGATGCCTCTAATCATTGGCTTTACCCGATAGAACTCGCCCGCGGGCTCCAGCTATCCTGAGGGAAACT
TCGGAGGGAACCAGCTACTAGACGGTTCGATTAGTCTTTCGCCCTATACCCAAGTCAGACGAACGATTTGAACGTCAGTATCGCTGCGGGCCTCCACCAG
AGTTTCCTCTGGCTTCGCTCCACTCAGGCATAGTTCACCATCTTGCGGGTCCCGACAGGTATGCTCTCACTCGAACCCTTCACAGAAGATCAGGGTCGGT
CGGCGTGCAACCCACAAGGGGATCCCACCAATCAGCTTCCTTGCGCCTTACGGGTTTACTTGCCCGCTGACTCGCACACATGTCAG