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Detailed information on CNT30724806


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3069623Lupinus angustifoliusQuercus suber11.120.3983.8793forward
CNT30196698Lupinus angustifoliusPisum sativum2123.8580.68176forward
CNT30488958Lupinus angustifoliusOlea europaea15.7525.1484.09132forward
CNT30174921Lupinus angustifoliusVigna angularis22.9139.3486.98192forward

Expression of CNT30724806

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MDFLRNSISNVSRLLWKTKARAKIRAFDC*

>peptide 2 (36 aa)
MCVRSHYLLSHFYIYNKFFFLHLFLFFSLFNLLLPK*

>peptide 3 (45 aa)
MFHVSYGKPKLEPKFVLSIANVLSCSYIELTAIAESCGKIWLIRP*

>peptide 4 (63 aa)
MMGLRSFVATLKSKIESLKVKKSYDKVEKSESMRVEIRSRKARKLIQDTLKIADSPKSKTYSF*

Sequence

>CNT30724806
AGTCAAATTGAACATTTTGAATTAAAATTGAGTTTCTAGCCAAACATATGGTTGAACTTTGGTTCTACTTAGTTTAGCTTATTCCCAAATCCTATATGTG
TGTAAGATCTCACTATTTGCTATCTCACTTCTATATCTACAACAAGTTTTTCTTTCTTCACTTGTTTCTCTTCTTCAGCCTATTCAACCTTCTGCTACCA
AAGTGAAAAGTACCACAAGAATCAACAAAGATAGTGATGATGGGTCTAAGAAGTTTTGTAGCTACTCTTAAATCCAAAATAGAATCTTTGAAAGTTAAGA
AATCTTATGATAAGGTGGAGAAGAGTGAAAGCATGAGAGTGGAGATAAGAAGTAGAAAGGCTAGAAAGCTTATTCAAGATACCCTAAAAATTGCTGATTC
ACCTAAGTCCAAAACTTATAGCTTTTAAGGCTACCCAGTTCGATCAGTGTTTTAAATTGCACCTGCAATCGCAATTGTGTTGTTGCAATATTGCGATTTC
GTAATTGCAATAATTGTAACTTAACCTGGTTGCGACTACATTTATAACCCTCCTTGCCCATACCCCTCATTATTCTCTTTACACACTTCCCCTCATTTAA
ATGAAGGGATCGTATGCTTCACCTCACTATCTATCCTACAAGAAGTTTCTTTGAGTTTCATTAAAAATATTATGGACTTTCTAAGGAATTCAATCTCAAA
TGTTTCACGTCTCTTATGGAAAACCAAAGCTCGAGCCAAAATTCGTGCTTTCGATTGCTAATGTTTTAAGTTGTAGTTACATTGAATTAACTGCTATTGC
GGAAAGTTGTGGGAAAATATGGTTGATAAGGCCATAAT