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Detailed information on CNT30724556


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697228Lupinus angustifoliusOryza sativa13.2741.3283.21131forward
CNT30676912Lupinus angustifoliusSetaria viridis13.2726.4184.73131forward
CNT30273043Lupinus angustifoliusChenopodium quinoa23.49.2581.82231forward
CNT30405165Lupinus angustifoliusBeta vulgaris11.7522.1484.48116forward
CNT30297329Lupinus angustifoliusTriticum aestivum6.4827.4787.564forward
CNT30390800Lupinus angustifoliusTriticum turgidum10.4447.0382.52103forward
CNT30663719Lupinus angustifoliusTriticum dicoccoides6.4824.5285.9464forward
CNT30263618Lupinus angustifoliusBrassica rapa22.731.8682.14224forward
CNT30216367Lupinus angustifoliusKalanchoe fedtschenkoi821.8284.8179forward
CNT30345070Lupinus angustifoliusEragrostis tef16.6228.8781.1164forward
CNT30479625Lupinus angustifoliusArabidopsis halleri9.732984.3896forward
CNT30334895Lupinus angustifoliusCynara cardunculus14.9936.3683.11148forward

Expression of CNT30724556

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MFAIKQDLWLHNWNQPIGTKPYCFQHTNHLLTS*

Sequence

>CNT30724556
AGATTATGCTTTTTTGCTACGATACAAAATATCATATTTTGTATATTACTTAAAGGAAAATTAATTAACTAGAAATACGAAGATATAATTATTTTGAGAT
ATATGATGATTGAAGTACATAACTCCTAACTCATAGCAAATGGTTTATTAAGTTGCAAAAGCGCATGTAACCATTAACAAAAATAGAGTCCAAGACCATA
TAATAACATTACACATTACAAGTTTTAGACAAATTAGTCTTCAATTCCATGCTCCTCCAACACCTTCTGTTACTGCTTGTGTTGATGTCTATATCATATT
CACTACTAACATCTTAGTAGGAATATCCTTTGACGAATAACTCCTTATTTGCTTCATCAGATTCACCTTCACCAGTGTACTTTCCAAGCTGAGCCAGTGA
GTTGGACTTGGCACGAAAAAGGAGTGCATCTTGTGCTGGACAGCAGAGGGAACTCTCCGGCGAAGGAGCTTGAGGGTGTAGTCAGCAACCTGCTGAGGAG
TTGCCCTCTCCTTTGACTCGGCTCCAGGAGTAACCATGCTAGGCTTCAGGAGAATGCCCTCAAACAGAACATTGTTCTCAGCAAGGTAGAAGAAAACTTC
AGCCCAGACCTTTTGCGCGACTTCGAAATTCCTTTCGATATTATGTTCGCCATCAAGCAAGATCTCTGGCTCCACAATTGGAACCAACCCATTGGCACCA
AACCCTATTGTTTTCAGCACACAAACCACTTGTTAACATCATAAATACTACTCAACTCTTCTTTCATTAGTCATCATGTCTCCAATAAGTATATAACTAT
TGTTTATGTAAGAAACTAAGAACATTTTCCTACATGGGCATACATACAAATATCAAATTGATATAAGAATTCCTGCTTATTCTTTTCAATATTTGTTAAG
GCACAACACAGACTGAAATGTCATTGTACTACTTCACATAGGAAAATAAGAAACATGGTACATTAGAGTTTAATTCCAGATGGCCTA